Evidence map›Paper›PMID 29662028›Full record

ArticleInternational journal of molecular sciences2018

Nitrate Reductases Are Relocalized to the Nucleus by AtSIZ1 and Their Levels Are Negatively Regulated by COP1 and Ammonium.

Joo Yong Kim, Bong Soo Park, Sang Woo Park, Han Yong Lee, Jong Tae Song, Hak Soo Seo

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

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  14. Protein Phosphatase (International journal of molecular sciences · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Joo Yong KimDepartment of Plant Science, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea. kjy90kjy@snu.ac.kr.
Bong Soo ParkDepartment of Plant Science, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea. bongsoo@tll.org.sg.
Sang Woo ParkDepartment of Plant Science, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea. nn4878@snu.ac.kr.
Han Yong LeeDepartment of Botany and Plant Pathology, Purdue University, West Lafayette, IN 47907, USA. lee2224@purdue.edu.ORCID 0000-0001-8833-7430
Jong Tae SongSchool of Applied Biosciences, Kyungpook National University, Daegu 41566, Korea. jtsong68@knu.ac.kr.
Hak Soo SeoDepartment of Plant Science, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul 151-921, Korea. seohs@snu.ac.kr.
Seoul National University · KRKyungpook National University · KRPurdue University West Lafayette · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nitrate reductases (NRs) catalyze the first step in the reduction of nitrate to ammonium. NR activity is regulated by sumoylation through the E3 ligase activity of AtSIZ1. However, it is not clear how NRs interact with AtSIZ1 in the cell, or how nitrogen sources affect NR levels and their cellular localization. Here, we show that the subcellular localization of NRs is modulated by the E3 SUMO (Small ubiquitin-related modifier) ligase AtSIZ1 and that NR protein levels are regulated by nitrogen sources. Transient expression analysis of GFP fusion proteins in onion epidermal cells showed that the NRs NIA1 and NIA2 localize to the cytoplasmic membrane, and that AtSIZ1 localizes to the nucleoplasm, including nuclear bodies, when expressed separately, whereas NRs and AtSIZ1 localize to the nucleus when co-expressed. Nitrate did not affect the subcellular localization of the NRs, but it caused AtSIZ1 to move from the nucleus to the cytoplasm. NRs were not detected in ammonium-treated cells, whereas the localization of AtSIZ1 was not altered by ammonium treatment. NR protein levels increased in response to nitrate but decreased in response to ammonium. In addition, NR protein levels increased in response to a 26S proteasome inhibitor and in

Indexed as

Active Transport, Cell NucleusAmmonium CompoundsArabidopsisArabidopsis ProteinsCell NucleusLigasesNitrate ReductaseNitratesUbiquitin-Protein LigasesAmmonium CompoundsArabidopsis ProteinsAT2G32950 protein, ArabidopsisLigasesNitrate ReductaseNitratesSIZ1 protein, ArabidopsisUbiquitin-Protein LigasesammoniumAtSIZ1COP1localizationNIA1NIA2nitratenitrate reductase

Identifiers

PMID29662028
PMCPMC5979280
OpenAlexW2797430366

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.