Evidence map›Paper›PMID 29661246›Full record

ArticleAIDS research and therapy2018

Risk factors and outcomes for the Q151M and T69 insertion HIV-1 resistance mutations in historic UK data.

Oliver T Stirrup, David T Dunn, Anna Tostevin, Caroline A Sabin, Anton Pozniak, David Asboe, Alison Cox, Chloe Orkin, Fabiola Martin, Patricia Cane and 2 more

Open access · goldAbstract read
In one paragraph

Article in AIDS research and therapy, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Oliver T StirrupCentre for Clinical Research in Infection and Sexual Health, Institute for Global Health, University College London, London, UK. oliver.stirrup@ucl.ac.uk.ORCID 0000-0002-8705-3281
David T DunnCentre for Clinical Research in Infection and Sexual Health, Institute for Global Health, University College London, London, UK.
Anna TostevinCentre for Clinical Research in Infection and Sexual Health, Institute for Global Health, University College London, London, UK.
Caroline A SabinCentre for Clinical Research, Epidemiology, Modelling and Evaluation, Institute for Global Health, University College London, Royal Free Campus, London, UK.
Anton PozniakChelsea and Westminster Hospital NHS Foundation Trust, London, UK.
David AsboeChelsea and Westminster Hospital NHS Foundation Trust, London, UK.
Alison CoxInfection and Immunity laboratory, Charing Cross Hospital, London, UK.
Chloe OrkinBarts Health NHS Trust, London, UK.
Fabiola MartinHull York Medical School, University of York, York, UK.
Patricia CaneHigh Containment Microbiology, Public Health England, Salisbury, UK.
UK HIV Drug Resistance Database
UK Collaborative HIV Cohort
Chelsea and Westminster Hospital NHS Foundation Trust · GBBarts Health NHS Trust · GBThe University of Queensland · AUUniversity College London · GBNational Institute for Health Research · GBPublic Health England · GBThe Royal Free Hospital · GB

Funding

Medical Research Council 164587Medical Research Council MC_U122886351Medical Research Council MC_UU_12023/15Medical Research Council MR/M004236/1Medical Research Council MR/R015600/1
6 · The paper itself

Abstract

backgroundThe prevalence of HIV-1 resistance to antiretroviral therapies (ART) has declined in high-income countries over recent years, but drug resistance remains a substantial concern in many low and middle-income countries. The Q151M and T69 insertion (T69i) resistance mutations in the viral reverse transcriptase gene can reduce susceptibility to all nucleoside/tide analogue reverse transcriptase inhibitors, motivating the present study to investigate the risk factors and outcomes associated with these mutations.

methodsWe considered all data in the UK HIV Drug Resistance Database for blood samples obtained in the period 1997-2014. Where available, treatment history and patient outcomes were obtained through linkage to the UK Collaborative HIV Cohort study. A matched case-control approach was used to assess risk factors associated with the appearance of each of the mutations in ART-experienced patients, and survival analysis was used to investigate factors associated with viral suppression. A further analysis using matched controls was performed to investigate the impact of each mutation on survival.

resultsA total of 180 patients with Q151M mutation and 85 with T69i mutation were identified, almost entirely from before 2006. Occurrence of both the Q151M and T69i mutations was strongly associated with cumulative period of virological failure while on ART, and for Q151M there was a particular positive association with use of stavudine and negative association with use of boosted-protease inhibitors. Subsequent viral suppression was negatively associated with viral load at sequencing for both mutations, and for Q151M we found a negative association with didanosine use but a positive association with boosted-protease inhibitor use. The results obtained in these analyses were also consistent with potentially large associations with other drugs. Analyses were inconclusive regarding associations between the mutations and mortality, but mortality was high for patients with low CD4 at detection.

conclusionsThe Q151M and T69i resistance mutations are now very rare in the UK. Our results suggest that good outcomes are possible for people with these mutations. However, in this historic sample, viral load and CD4 at detection were important factors in determining prognosis.

Indexed as

MutationAnti-HIV AgentsBayes TheoremCase-Control StudiesCohort StudiesDrug Resistance, Multiple, ViralHIV-1HIV InfectionsHIV Reverse TranscriptaseHumansMolecular EpidemiologyReverse Transcriptase InhibitorsRisk FactorsStavudineSurvival AnalysisTreatment OutcomeAnti-HIV AgentsHIV Reverse TranscriptaseReverse Transcriptase InhibitorsStavudine151 complex69 insertion complexHIVMultidrug resistanceMulti-NRTI resistanceNRTI

Identifiers

PMID29661246
PMCPMC5902836
OpenAlexW2801444954

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.