Evidence map›Paper›PMID 29659983›Full record

ArticleJournal of experimental botany2018

Inorganic carbon and pH dependency of photosynthetic rates in Trichodesmium.

Tobias G Boatman, Niall M Mangan, Tracy Lawson, Richard J Geider

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Tobias G BoatmanSchool of Biological Sciences, University of Essex, Wivenhoe Park, Colchester, Essex, UK.
Niall M ManganDepartment of Engineering Sciences and Applied Mathematics, Northwestern University, Evanston, Illinois, USA.
Tracy LawsonSchool of Biological Sciences, University of Essex, Wivenhoe Park, Colchester, Essex, UK.
Richard J GeiderSchool of Biological Sciences, University of Essex, Wivenhoe Park, Colchester, Essex, UK.
University of Essex · GBNorthwestern University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Increasing atmospheric CO2 concentrations are leading to increases in dissolved CO2 and HCO3- concentrations and decreases in pH and CO32- in the world's oceans. There remain many uncertainties as to the magnitude of biological responses of key organisms to these chemical changes. In this study, we established the relationship between photosynthetic carbon fixation rates and pH, CO2, and HCO3- concentrations in the diazotroph, Trichodesmium erythraeum IMS101. Inorganic 14C-assimilation was measured in TRIS-buffered artificial seawater medium where the absolute and relative concentrations of CO2, pH, and HCO3- were manipulated. First, we varied the total dissolved inorganic carbon concentration (TIC) (<0 to ~5 mM) at constant pH, so that ratios of CO2 and HCO3- remained relatively constant. Second, we varied pH (~8.54 to 7.52) at constant TIC, so that CO2 increased whilst HCO3- declined. We found that 14C-assimilation could be described by the same function of CO2 for both approaches, but it showed different dependencies on HCO3- when pH was varied at constant TIC than when TIC was varied at constant pH. A numerical model of the carbon-concentrating mechanism (CCM) of Trichodesmium showed that carboxylation rates are modulated by HCO3- and pH. The decrease in assimilation of inorganic carbon (Ci) at low CO2, when TIC was varied, was due to HCO3- uptake limitation of the carboxylation rate. Conversely, when pH was varied, Ci assimilation declined due to a high-pH mediated increase in HCO3- and CO2 leakage rates, potentially coupled to other processes (uncharacterised within the CCM model) that restrict Ci assimilation rates under high-pH conditions.

Indexed as

PhotosynthesisCarbonCarbon DioxideHydrogen-Ion ConcentrationTrichodesmiumCarbonCarbon Dioxide

Identifiers

PMID29659983
PMCPMC6022602
OpenAlexW2801822681

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.