Evidence map›Paper›PMID 29659945›Full record

ArticleThe Journal of infectious diseases2018

Plasmodium falciparum Falcipain-2a Polymorphisms in Southeast Asia and Their Association With Artemisinin Resistance.

Faiza A Siddiqui, Mynthia Cabrera, Meilian Wang, Awtum Brashear, Karen Kemirembe, Zenglei Wang, Jun Miao, Thanat Chookajorn, Zhaoqing Yang, Yaming Cao and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of infectious diseases, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 2 pooled it
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 2 syntheses or guidelines pooled it, 64 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Article
  6. Frontiers in cellular and infection microbiology · 2024
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  7. Putative molecular markers ofFrontiers in epidemiology · 2024
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  8. Antimicrobial agents and chemotherapy · 2023
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  9. Antimalarial drug discovery: progress and approaches.Nature reviews. Drug discovery · 2023
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  12. Different In Vitro Drug Susceptibility Profile ofTropical medicine and infectious disease · 2022
    Article
  13. Article
  14. Article
  15. Plasmodium falciparum resistance to ACTs: Emergence, mechanisms, and outlook.International journal for parasitology. Drugs and drug resistance · 2021
    Article
  16. Artemisinin resistance: an important emerging clinical problem in tropical medicine.International journal of physiology, pathophysiology and pharmacology · 2021
    Review
  17. Article
  18. ACS infectious diseases · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 4 countries.

Faiza A SiddiquiDepartment of Entomology, Pennsylvania State University, University Park.
Mynthia CabreraDepartment of Entomology, Pennsylvania State University, University Park.
Meilian WangCollege of Basic Medical Sciences, China Medical University, Shenyang.
Awtum BrashearDepartment of Entomology, Pennsylvania State University, University Park.
Karen KemirembeDepartment of Entomology, Pennsylvania State University, University Park.
Zenglei WangDepartment of Entomology, Pennsylvania State University, University Park.
Jun MiaoDepartment of Entomology, Pennsylvania State University, University Park.
Thanat ChookajornGenomics and Evolutionary Medicine Unit, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand.
Zhaoqing YangDepartment of Pathogen Biology and Immunology, Kunming Medical University, China.
Yaming CaoCollege of Basic Medical Sciences, China Medical University, Shenyang.
Gang DongMax F. Perutz Laboratories, Medical University of Vienna, Austria.
Philip J RosenthalDepartment of Medicine, University of California, San Francisco.
Liwang CuiDepartment of Entomology, Pennsylvania State University, University Park.
Pennsylvania State University · USChina Medical University · CNKunming Medical University · CNMahidol Oxford Tropical Medicine Research Unit · THMedical University of Vienna · ATUniversity of California, San Francisco · US

Funding

Southeast Asia Malaria Research CenterU19AI089672 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI CUI, LIWANG · 2010 to 2023
$28.9M
Molecular Mechanisms of Artemisinin ResistanceR01AI128940 · NIAID · UNIVERSITY OF SOUTH FLORIDA · PI CUI, LIWANG · 2017 to 2021
$971k
Austrian Science Fund FWF P 28231NIAID NIH HHS R01 AI128940NIAID NIH HHS U19 AI089672
6 · The paper itself

Abstract

Background: Falcipain-2a ([FP2a] PF3D7_1115700) is a Plasmodium falciparum cysteine protease and hemoglobinase. Functional FP2a is required for potent activity of artemisinin, and in vitro selection for artemisinin resistance selected for an FP2a nonsense mutation. Methods: To investigate associations between FP2a polymorphisms and artemisinin resistance and to characterize the diversity of the enzyme in parasites from the China-Myanmar border, we sequenced the full-length FP2a gene in 140 P falciparum isolates collected during 2004-2011. Results: The isolates were grouped into 8 different haplotype groups. Haplotype group I appeared in samples obtained after 2008, coinciding with implementation of artemisinin-based combination therapy in this region. In functional studies, compared with wild-type parasites, the FP2a haplotypes demonstrated increased ring survival, and all haplotype groups exhibited significantly reduced FP2a activity, with group I showing the slowest protease kinetics and reduced parasite fitness. Conclusions: These results suggest that altered hemoglobin digestion due to FP2a mutations may contribute to artemisinin resistance.

Indexed as

Drug ResistanceGenetic VariationAntimalarialsArtemisininsChinaCysteine EndopeptidasesDNA, ProtozoanHaplotypesHumansMalaria, FalciparumMyanmarPlasmodium falciparumSequence Analysis, DNAAntimalarialsartemisininArtemisininsCysteine EndopeptidasesDNA, Protozoanfalcipain 2

Identifiers

PMID29659945
PMCPMC6048984
OpenAlexW2801946410

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.