Evidence map›Paper›PMID 29658273›Full record

ArticleEnvironmental science & technology2018

Dual Role of Humic Substances As Electron Donor and Shuttle for Dissimilatory Iron Reduction.

Noah Stern, Jacqueline Mejia, Shaomei He, Yu Yang, Matthew Ginder-Vogel, Eric E Roden

Open access · greenAbstract read
In one paragraph

Article in Environmental science & technology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 215 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Latest development in the fabrication and use of lignin-derived humic acid.Biotechnology for biofuels and bioproducts · 2023
    Review
  10. Article
  11. Review
  12. Biochar-Mediated Degradation of Roxarsone byFrontiers in microbiology · 2022
    Article
  13. Review
  14. Humin Assists Reductive Acetogenesis in Absence of Other External Electron Donor.International journal of environmental research and public health · 2020
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Noah SternDepartment of Civil and Environmental Engineering, Environmental Chemistry and Technology Program , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.
Jacqueline MejiaDepartment of Civil and Environmental Engineering, Environmental Chemistry and Technology Program , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.
Shaomei HeDepartment of Geoscience , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.
Yu YangDepartment of Civil and Environmental Engineering , University of Nevada-Reno , Reno , Nevada 89557 , United States.
Matthew Ginder-VogelDepartment of Civil and Environmental Engineering, Environmental Chemistry and Technology Program , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.ORCID 0000-0001-9183-1931
Eric E RodenDepartment of Geoscience , University of Wisconsin-Madison , Madison , Wisconsin 53706 , United States.ORCID 0000-0002-1555-4343
University of Wisconsin–Madison · USUniversity of Nevada, Reno · US

Funding

BIOTECHNOLOGY TRAINING PROGRAMT32GM008349 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI FOX, BRIAN G · 1989 to 2019
$22.5M
NIGMS NIH HHS T32 GM008349
6 · The paper itself

Abstract

Dissimilatory iron-reducing bacteria (DIRB) are known to use humic substances (HS) as electron shuttles for dissimilatory iron reduction (DIR) by transferring electrons to HS-quinone moieties, which in turn rapidly reduce Fe(III) oxides. However, the potential for HS to serve as a source of organic carbon (OC) that can donate electrons for DIR is unknown. We studied whether humic acids (HA) and humins (HM) recovered from peat soil by sodium pyrophosphate extraction could serve as both electron shuttles and electron donors for DIR by freshwater sediment microorganisms. Both HA and HM served as electron shuttles in cultures amended with glucose. However, only HA served as an electron donor for DIR. Metagenomes from HA-containing cultures had an overrepresentation of genes involved in polysaccharide and to a lesser extent aromatic compound degradation, suggesting complex OC metabolism. Genomic searches for the porin-cytochrome complex involved in DIR resulted in matches to Ignavibacterium/Melioribacter, DIRB capable of polymeric OC metabolism. These results indicate that such taxa may have played a role in both DIR and decomposition of complex OC. Our results suggest that decomposition of HS coupled to DIR and other anaerobic pathways could play an important role in soil and sediment OC metabolism.

Indexed as

ElectronsHumic SubstancesFerric CompoundsIronOxidation-ReductionFerric CompoundsHumic SubstancesIron

Identifiers

PMID29658273
PMCPMC6211804
OpenAlexW2802954958

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.