Evidence map›Paper›PMID 29656236›Full record

ReviewCurrent opinion in biotechnology2018

Advancing systems immunology through data-driven statistical analysis.

Linda E Fong, Andrés R Muñoz-Rojas, Kathryn Miller-Jensen

Abstract readReview
In one paragraph

Review in Current opinion in biotechnology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Current Challenges in Vaccinology.Frontiers in immunology · 2020
    Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Linda E FongDepartment of Biomedical Engineering, Yale University, New Haven, CT, USA.
Andrés R Muñoz-RojasDepartment of Biomedical Engineering, Yale University, New Haven, CT, USA.
Kathryn Miller-JensenDepartment of Biomedical Engineering, Yale University, New Haven, CT, USA; Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT, USA. Electronic address: kathryn.miller-jensen@yale.edu.

Funding

Systems analysis of cell-to-cell variability and signaling-transcription factor motifs regulating macrophage responses to conflicting environmental cuesR01GM123011 · NIGMS · YALE UNIVERSITY · PI MILLER-JENSEN, KATHRYN · 2017 to 2025
$2.5M
Discovery and characterization of modified signaling networks in latent HIV-infected T cells using CyTOFR21AI132013 · NIAID · YALE UNIVERSITY · PI MILLER-JENSEN, KATHRYN · 2017 to 2018
$432k
NIAID NIH HHS R21 AI132013NIGMS NIH HHS R01 GM123011
6 · The paper itself

Abstract

Systems biology provides an effective approach to decipher, predict, and ultimately manipulate the complex and inter-connected networks that regulate the immune system. Advances in high-throughput, multiplexed experimental techniques have increased the availability of proteomic and transcriptomic immunological datasets, and as a result, have also accelerated the development of new data-driven computational algorithms to extract biological insight from these data. This review highlights how data-driven statistical models have been used to characterize immune cell subsets and their functions, to map the signaling and intercellular networks that regulate immune responses, and to connect immune cell states to disease outcomes to generate hypotheses for novel therapeutic strategies. We focus on recent advances in evaluating immune cell responses following viral infection and in the tumor microenvironment, which hold promise for improving vaccines, antiviral and cancer immunotherapy.

Indexed as

Data AnalysisStatistics as TopicSystems BiologyAnimalsHumansImmune SystemNeoplasmsSignal Transduction

Identifiers

PMID29656236
PMCPMC6294467

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.