Evidence map›Paper›PMID 29654426›Full record

ArticleJournal of biological physics2018

Direct visualization of single virus restoration after damage in real time.

Pedro J de Pablo, Mercedes Hernando-Pérez, Carolina Carrasco, José L Carrascosa

Open access · bronzeAbstract read
In one paragraph

Article in Journal of biological physics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Mechanical Properties of Viruses.Sub-cellular biochemistry · 2024
    Review
  2. Review
  3. Article
  4. Article
  5. Lipid Self-Assemblies under the Atomic Force Microscope.International journal of molecular sciences · 2021
    Review
  6. Review
  7. Physical virology: From virus self-assembly to particle mechanics.Wiley interdisciplinary reviews. Nanomedicine and nanobiotechnology · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Pedro J de PabloDepartamento de Física de la Materia Condensada and Instituto de Física de la Materia Condensada IFIMAC, Universidad Autónoma de Madrid, 28049, Madrid, Spain. p.j.depablo@uam.es.ORCID 0000-0003-2386-3186
Mercedes Hernando-PérezCentro Nacional de Biotecnología CNB, CSIC, 28049, Madrid, Spain.
Carolina CarrascoCentro Nacional de Biotecnología CNB, CSIC, 28049, Madrid, Spain.
José L CarrascosaCentro Nacional de Biotecnología CNB, CSIC, 28049, Madrid, Spain. jlcarras@cnb.csic.es.
Centro Nacional de Biotecnología · ESUniversidad Autónoma de Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We use the nano-dissection capabilities of atomic force microscopy to induce structural alterations on individual virus capsids in liquid milieu. We fracture the protein shells either with single nanoindentations or by increasing the tip-sample interaction force in amplitude modulation dynamic mode. The normal behavior is that these cracks persist in time. However, in very rare occasions they self-recuperate to retrieve apparently unaltered virus particles. In this work, we show the topographical evolution of three of these exceptional events occurring in T7 bacteriophage capsids. Our data show that single nanoindentation produces a local recoverable fracture that corresponds to the deepening of a capsomer. In contrast, imaging in dynamic mode induced cracks that separate the virus morphological subunits. In both cases, the breakage patterns follow intratrimeric loci.

Indexed as

Microscopy, Atomic ForceBacteriophage T7Biomechanical PhenomenaCapsidTime FactorsVirionAFMBreakageCapsidCrackFailureFractureMechanicsNanoindentation

Identifiers

PMID29654426
PMCPMC5928024
OpenAlexW2796630642

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.