Evidence map›Paper›PMID 29654269›Full record

ArticleLeukemia2018

Kinase domain activation through gene rearrangement in multiple myeloma.

Gareth J Morgan, Jie He, Ruslana Tytarenko, Purvi Patel, Owen W Stephens, Shan Zhong, Shayu Deshpande, Michael Bauer, Niels Weinhold, Carolina Schinke and 12 more

Open access · hybridAbstract read
In one paragraph

Article in Leukemia, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Multiomic Mapping of Acquired Chromosome 1 Copy-Number and Structural Variants to Identify Therapeutic Vulnerabilities in Multiple Myeloma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Article
  3. Myeloma Genome Project Panel is a Comprehensive Targeted Genomics Panel for Molecular Profiling of Patients with Multiple Myeloma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2022
    Article
  4. Article
  5. Review
  6. Chromothripsis as a pathogenic driver of multiple myeloma.Seminars in cell & developmental biology · 2022
    Review
  7. Pathogenic signaling in multiple myeloma.Seminars in oncology · 2022
    Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 4 institutions in 1 country.

Gareth J MorganThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Jie HeFoundation Medicine Inc., Cambridge, MA, USA.
Ruslana TytarenkoThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Purvi PatelThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Owen W StephensThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Shan ZhongFoundation Medicine Inc., Cambridge, MA, USA.
Shayu DeshpandeThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Michael BauerThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.ORCID http://orcid.org/0000-0003-2498-7295
Niels WeinholdThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Carolina SchinkeThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Leo RascheThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Mark BaileyFoundation Medicine Inc., Cambridge, MA, USA.
Siraj AliFoundation Medicine Inc., Cambridge, MA, USA.
Jeff RossFoundation Medicine Inc., Cambridge, MA, USA.
Vincent A MillerFoundation Medicine Inc., Cambridge, MA, USA.
Phillip StephensFoundation Medicine Inc., Cambridge, MA, USA.
Sharmilan ThanendrarajanThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Maurizio ZangariThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Frits van RheeThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Tariq MughalFoundation Medicine Inc., Cambridge, MA, USA.
Faith E DaviesThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA.
Brian A WalkerThe Myeloma Institute, University of Arkansas for Medical Sciences, Little Rock, AR, USA. Bwalker2@uams.edu.ORCID http://orcid.org/0000-0002-8615-6254
University of Arkansas for Medical Sciences · USFoundation Medicine (United States)Tufts University · USUniversity of Arkansas Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chromosomal rearrangements that result in oncogenic kinase activation are present in many solid and hematological malignancies, but none have been reported in multiple myeloma (MM). Here we analyzed 1421 samples from 958 myeloma patients using a targeted assay and detected fusion genes in 1.5% of patients. These fusion genes were in-frame and the majority of them contained kinase domains from either receptor tyrosine kinases (ALK, ROS1, NTRK3, and FGFR1) or cytoplasmic kinases (BRAF, MAP3K14, and MAPK14), which would result in the activation of MEK/ERK, NF-κB, or inflammatory signaling pathways. Fusion genes were present in smoldering MM, newly diagnosed MM, and relapse patient samples indicating they are not solely late events. Most fusion genes were subclonal in nature, but one EML4-ALK fusion was clonal indicating it is a driver of disease pathogenesis. Samples with fusions of receptor tyrosine kinases were not found in conjunction with clonal Ras/Raf mutations indicating a parallel mechanism of MEK/ERK pathway activation. Fusion genes involving MAP3K14 (NIK), which regulates the NF-κB pathway, were detected as were t(14;17) rearrangements involving NIK in 2% of MM samples. Activation of kinases in myeloma through rearrangements presents an opportunity to use treatments existing in other cancers.

Indexed as

Amino Acid SequenceAnaplastic Lymphoma KinaseGene RearrangementHumansMultiple MyelomaMutationNeoplasm Recurrence, LocalNF-kappa BOncogene Proteins, FusionPhosphotransferasesProtein DomainsProtein-Tyrosine KinasesProto-Oncogene Proteins B-rafReceptor Protein-Tyrosine KinasesSignal TransductionAnaplastic Lymphoma KinaseNF-kappa BOncogene Proteins, FusionPhosphotransferasesProtein-Tyrosine KinasesProto-Oncogene Proteins B-rafReceptor Protein-Tyrosine Kinases

Identifiers

PMID29654269
PMCPMC6224403
OpenAlexW2790451805

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.