Evidence map›Paper›PMID 29653917›Full record

ArticleJMIR medical informatics2018

Privacy-Preserving Patient Similarity Learning in a Federated Environment: Development and Analysis.

Junghye Lee, Jimeng Sun, Fei Wang, Shuang Wang, Chi-Hyuck Jun, Xiaoqian Jiang

Abstract read
In one paragraph

Article in JMIR medical informatics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Privacy-preserving decentralized learning methods for biomedical applications.Computational and structural biotechnology journal · 2024
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  13. Transformers and large language models in healthcare: A review.Artificial intelligence in medicine · 2024
    Review
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  15. Review
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  18. TinyML-Based Lightweight AI Healthcare Mobile Chatbot Deployment.Journal of multidisciplinary healthcare · 2024
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Junghye LeeSchool of Management Engineering, Ulsan National Institute of Science and Technology, Ulsan, Republic Of Korea.ORCID http://orcid.org/0000-0002-9736-4796
Jimeng SunCollege of Computing, Georgia Institute of Technology, Atlanta, GA, United States.ORCID http://orcid.org/0000-0003-1512-6426
Fei WangDivision of Health Informatics, Department of Healthcare Policy and Research, Weill Cornell Medical College, Cornell University, New York City, NY, United States.ORCID http://orcid.org/0000-0002-7594-663X
Shuang WangDepartment of Biomedical Informatics, University of California San Diego, San Diego, CA, United States.ORCID http://orcid.org/0000-0001-6420-983X
Chi-Hyuck JunDepartment of Industrial and Management Engineering, Pohang University of Science and Technology, Pohang, Republic Of Korea.ORCID http://orcid.org/0000-0003-0911-7347
Xiaoqian JiangDepartment of Biomedical Informatics, University of California San Diego, San Diego, CA, United States.ORCID http://orcid.org/0000-0001-9933-2205

Funding

iDASH: Integrating Data for Analysis, Anonymization, and SharingU54HL108460 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI OHNO-MACHADO, LUCILA · 2010 to 2015
$19.1M
Open Health Natural Language Processing CollaboratoryU01TR002062 · NCATS · MAYO CLINIC ROCHESTER · PI JIANG, XIAOQIAN, LIU, HONGFANG · 2017 to 2021
$7.6M
iCONCUR: informed CONsent for Clinical data and biosample Use for ResearchR01HG008802 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JIANG, XIAOQIAN, KIM, HYEON-EUI · 2015 to 2017
$1.3M
SHARE: Statistical Health Information Release with Differential PrivacyR01GM114612 · NIGMS · EMORY UNIVERSITY · PI XIONG, LI · 2015 to 2017
$1.0M
Privacy preserving technologies for human genome data analysis and disseminationR01HG007078 · NHGRI · TRUSTEES OF INDIANA UNIVERSITY · PI TANG, HAIXU, WANG, XIAOFENG · 2013 to 2015
$886k
Protection of Records: Privacy (PReP) Technology for Medical ResearchR00LM011392 · NLM · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JIANG, XIAOQIAN · 2013 to 2015
$650k
Protecting the pRivacy Of Genomes in REsearch StudieS (PROGRESS)R00HG008175 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WANG, SHUANG · 2016 to 2018
$527k
Protect Privacy of Healthcare Data in the CloudR21LM012060 · NLM · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JIANG, XIAOQIAN · 2014 to 2015
$376k
NCATS NIH HHS U01 TR002062NHGRI NIH HHS R00 HG008175NHGRI NIH HHS R01 HG007078NHGRI NIH HHS R01 HG008802NHLBI NIH HHS U54 HL108460NIGMS NIH HHS R01 GM114612NLM NIH HHS R00 LM011392NLM NIH HHS R21 LM012060
6 · The paper itself

Abstract

backgroundThere is an urgent need for the development of global analytic frameworks that can perform analyses in a privacy-preserving federated environment across multiple institutions without privacy leakage. A few studies on the topic of federated medical analysis have been conducted recently with the focus on several algorithms. However, none of them have solved similar patient matching, which is useful for applications such as cohort construction for cross-institution observational studies, disease surveillance, and clinical trials recruitment.

objectiveThe aim of this study was to present a privacy-preserving platform in a federated setting for patient similarity learning across institutions. Without sharing patient-level information, our model can find similar patients from one hospital to another.

methodsWe proposed a federated patient hashing framework and developed a novel algorithm to learn context-specific hash codes to represent patients across institutions. The similarities between patients can be efficiently computed using the resulting hash codes of corresponding patients. To avoid security attack from reverse engineering on the model, we applied homomorphic encryption to patient similarity search in a federated setting.

resultsWe used sequential medical events extracted from the Multiparameter Intelligent Monitoring in Intensive Care-III database to evaluate the proposed algorithm in predicting the incidence of five diseases independently. Our algorithm achieved averaged area under the curves of 0.9154 and 0.8012 with balanced and imbalanced data, respectively, in κ-nearest neighbor with κ=3. We also confirmed privacy preservation in similarity search by using homomorphic encryption.

conclusionsThe proposed algorithm can help search similar patients across institutions effectively to support federated data analysis in a privacy-preserving manner.

Indexed as

federated environmenthashinghomomorphic encryptionprivacysimilarity learning

Identifiers

PMID29653917
PMCPMC5924379

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.