Evidence map›Paper›PMID 29652918›Full record

ArticlePloS one2018

A genome-wide association study of red-blood cell fatty acids and ratios incorporating dietary covariates: Framingham Heart Study Offspring Cohort.

Anya Kalsbeek, Jenna Veenstra, Jason Westra, Craig Disselkoen, Kristin Koch, Katelyn A McKenzie, Jacob O'Bott, Jason Vander Woude, Karen Fischer, Greg C Shearer and 2 more

Abstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Use of Mendelian Randomization to Unveil Metabolic Markers inJournal of Korean medical science · 2026
    Pooled it
  2. Trial
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  14. Role of Stearoyl-CoA Desaturase 1 in Cardiovascular Physiology.International journal of molecular sciences · 2023
    Review
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  16. Article
  17. Observational
  18. Red blood cell fatty acid patterns from 7 countries: Focus on the Omega-3 index.Prostaglandins, leukotrienes, and essential fatty acids · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Anya KalsbeekDepartment of Mathematics, Statistics and Computer Science, Dordt College, Sioux Center, Iowa, United States of America.ORCID 0000-0001-7215-1236
Jenna VeenstraDepartment of Mathematics, Statistics and Computer Science, Dordt College, Sioux Center, Iowa, United States of America.
Jason WestraDepartment of Mathematics, Statistics and Computer Science, Dordt College, Sioux Center, Iowa, United States of America.
Craig DisselkoenDepartment of Mathematics, Statistics and Computer Science, Dordt College, Sioux Center, Iowa, United States of America.
Kristin KochDepartment of Statistics, Baylor University, Waco, TX, United States of America.
Katelyn A McKenzieDepartment of Statistics, Duke University, Durham, NC, United States of America.
Jacob O'BottDepartment of Mathematics and Statistics, University of Maryland- Baltimore County, Baltimore, MD, United States of America.
Jason Vander WoudeDepartment of Mathematics, Statistics and Computer Science, Dordt College, Sioux Center, Iowa, United States of America.
Karen FischerDepartment of Mathematics, Statistics and Computer Science, Dordt College, Sioux Center, Iowa, United States of America.
Greg C ShearerDepartment of Nutritional Sciences, Penn State University, State College, PA, United States of America.
William S HarrisOmegaQuant, Sioux Falls, SD, United States of America.
Nathan L TintleDepartment of Mathematics, Statistics and Computer Science, Dordt College, Sioux Center, Iowa, United States of America.

Funding

Analyzing the behavior and interpreting the results of gene based tests of rare variant associationR15HG006915 · NHGRI · DORDT COLLEGE · PI TINTLE, NATHAN L · 2012 to 2020
$1.3M
Red Blood Cell Fatty Acid Biomarkers and Cardiovascular Disease RiskR01HL089590 · NHLBI · SANFORD RESEARCH/USD · PI HARRIS, WILLIAM S · 2008 to 2011
$683k
THE FRAMINGHAM HEART STUDY-N01HC25195-268025195-268025195N01HC025195 · HC · TRUSTEES OF BOSTON UNIVERSITY · PI WOLF, PHILIP A · 2002 to 2006
–
NHGRI NIH HHS R15 HG006915NHLBI NIH HHS N01 HC025195NHLBI NIH HHS R01 HL089590NIH HHS 1R15HG006915NIH HHS 2R15HG006915NIH HHS N01-HC-25195NIH HHS R01- HL089590
6 · The paper itself

Abstract

Recent analyses have suggested a strong heritable component to circulating fatty acid (FA) levels; however, only a limited number of genes have been identified which associate with FA levels. In order to expand upon a previous genome wide association study done on participants in the Framingham Heart Study Offspring Cohort and FA levels, we used data from 2,400 of these individuals for whom red blood cell FA profiles, dietary information and genotypes are available, and then conducted a genome-wide evaluation of potential genetic variants associated with 22 FAs and 15 FA ratios, after adjusting for relevant dietary covariates. Our analysis found nine previously identified loci associated with FA levels (FADS, ELOVL2, PCOLCE2, LPCAT3, AGPAT4, NTAN1/PDXDC1, PKD2L1, HBS1L/MYB and RAB3GAP1/MCM6), while identifying four novel loci. The latter include an association between variants in CALN1 (Chromosome 7) and eicosapentaenoic acid (EPA), DHRS4L2 (Chromosome 14) and a FA ratio measuring delta-9-desaturase activity, as well as two loci associated with less well understood proteins. Thus, the inclusion of dietary covariates had a modest impact, helping to uncover four additional loci. While genome-wide association studies continue to uncover additional genes associated with circulating FA levels, much of the heritable risk is yet to be explained, suggesting the potential role of rare genetic variation, epistasis and gene-environment interactions on FA levels as well. Further studies are needed to continue to understand the complex genetic picture of FA metabolism and synthesis.

Indexed as

DietGenome-Wide Association StudyCohort StudiesErythrocytesFatty AcidsFemaleGenetic Association StudiesGenetic LociHumansMalePolymorphism, Single NucleotideFatty Acids

Identifiers

PMID29652918
PMCPMC5898718

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.