Evidence map›Paper›PMID 29651410›Full record

ArticleFrontiers in cellular and infection microbiology2018

Analysis of microRNAs Expression Profiles in Madin-Darby Bovine Kidney Cells Infected With Caprine Parainfluenza Virus Type 3.

Jizong Li, Li Mao, Wenliang Li, Fei Hao, Chunyan Zhong, Xing Zhu, Xinqin Ji, Leilei Yang, Wenwen Zhang, Maojun Liu and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Jizong LiInstitute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Li MaoInstitute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Wenliang LiInstitute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Fei HaoInstitute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Chunyan ZhongInstitute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Xing ZhuCollege of Animal Science, Guizhou University, Guiyang, China.
Xinqin JiCollege of Animal Science, Guizhou University, Guiyang, China.
Leilei YangInstitute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Wenwen ZhangInstitute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Maojun LiuInstitute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Jieyuan JiangInstitute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Jiangsu Academy of Agricultural Sciences · CNGuizhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Caprine parainfluenza virus type 3 (CPIV3) is a newly emerging pathogenic respiratory agent infecting both young and adult goats, and it was identified in eastern China in 2013. Cellular microRNAs (miRNAs) have been reported to be important modulators of the intricate virus-host interactions. In order to elucidate the role of miRNAs in madin-darby bovine kidney (MDBK) cells during CPIV3 infection. In this study, we performed high-throughput sequencing technology to analyze small RNA libraries in CPIV3-infected and mock-infected MDBK cells. The results showed that a total of 249 known and 152 novel candidate miRNAs were differentially expressed in MDBK cells after CPIV3 infection, and 22,981 and 22,572 target genes were predicted, respectively. In addition, RT-qPCR assay was used to further confirm the expression patterns of 13 of these differentially expressed miRNAs and their mRNA targets. Functional annotation analysis showed these up- and downregulated target genes were mainly involved in MAPK signaling pathway, Jak-STAT signaling pathway, Toll-like receptor signaling pathway, p53 signaling pathway, focal adhesion, NF-kappa B signaling pathway, and apoptosis, et al. To our knowledge, this is the first report of the comparative expression of miRNAs in MDBK cells after CPIV3 infection. Our finding provides information concerning miRNAs expression profile in response to CPIV3 infection, and offers clues for identifying potential candidates for antiviral therapies against CPIV3.

Indexed as

AnimalsCattleCattle DiseasesCell LineGene Expression ProfilingKidneyMicroRNAsReal-Time Polymerase Chain ReactionRespirovirusRespirovirus InfectionsMicroRNAscaprine parainfluenza virus type 3high-throughput sequencinghost-pathogen interactionsmadin-darby bovine kidney cell linemicroRNAs

Identifiers

PMID29651410
PMCPMC5885596
OpenAlexW2795251701

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.