ArticleScientific reports2018
Metabarcoding analysis of strongylid nematode diversity in two sympatric primate species.
Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 1 of them a synthesis that pooled it.
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Who cites it
35 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Transforming gastrointestinal helminth parasite identification in vertebrate hosts with metabarcoding: a systematic review.Parasites & vectors · 2024Pooled it
- Enhanced detection of equine strongyles: Insights from morphological and nemabiome metabarcoding approaches in northern Iran.Equine veterinary journal · 2026Article
- Of hot springs and holobionts: linking hot spring bathing behavior, parasitism, and gut microbiome in Japanese macaques.Primates; journal of primatology · 2026Article
- Strongyloides Genetic Diversity among Humans, Dogs, and Nonhuman Primates, Central African Republic, 2016-2022.Emerging infectious diseases · 2026Article
- Developmental plasticity enables an intestinal tapeworm to adapt to dietary stress.Nature communications · 2026Article
- Scoop That Poop: Optimising Faecal Sample Pre-Processing for Parasite Metabarcoding.Molecular ecology resources · 2026Article
- Shaping the human gut microbiota: The role of canine companionship, lifestyle choices, andOne health (Amsterdam, Netherlands) · 2025Article
- Intraspecific variability of rice root knot nematodes across diverse agroecosystems for sustainable management.Scientific reports · 2024Article
- Gastrointestinal parasite prevalence, diversity and association in free-ranging Chacma baboon troops in a semi-arid savanna ecosystem of Zimbabwe.International journal for parasitology. Parasites and wildlife · 2024Article
- Co-introduction into a delicate island ecosystem: metastrongyloid nematodes (superfamily Metastrongyloidea) of veterinary and medical importance circulating in aquatic and terrestrial environments of Tenerife (Canary Islands).Parasitology research · 2024Article
- Mixed strongyle parasite infections vary across host age and space in a population of feral horses.Parasitology · 2024Article
- Gastrointestinal nematodes in German outdoor-reared pigs based on faecal egg count and next-generation sequencing nemabiome data.Porcine health management · 2024Article
- Gastrointestinal Parasites in Non-Human Primates in Zoological Gardens in Northern Italy.Animals : an open access journal from MDPI · 2024Article
- Nemabiome metabarcoding shows a high prevalence of Haemonchus contortus and predominance of Camelostrongylus mentulatus in alpaca herds in the northern UK.Parasitology research · 2024Article
- Novel insight into the genetic diversity of strongylid nematodes infecting South-East and East Asian primates.Parasitology · 2024Article
- Metabarcoding study to reveal the structural community of strongylid nematodes in domesticated horses in Thailand.BMC veterinary research · 2024Article
- Patterns of Equine Small Strongyle Species Infection after Ivermectin Intervention in Thailand: Egg Reappearance Period and Nemabiome Metabarcoding Approach.Animals : an open access journal from MDPI · 2024Article
- Identification of Trichinella taxa by ITS-1 amplicon next-generation sequencing with an improved resolution for detecting underrepresented genotypes in mixed natural infections.Parasites & vectors · 2023Article
- High diversity and sharing of strongylid nematodes in humans and great apes co-habiting an unprotected area in Cameroon.PLoS neglected tropical diseases · 2023Article
- Faecal metabarcoding provides improved detection and taxonomic resolution for non-invasive monitoring of gastrointestinal nematode parasites in wild moose populations.Parasites & vectors · 2023Article
Corrections and comments
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Authors and funding
9 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Strongylid nematodes in large terrestrial herbivores such as great apes, equids, elephants, and humans tend to occur in complex communities. However, identification of all species within strongylid communities using traditional methods based on coproscopy or single nematode amplification and sequencing is virtually impossible. High-throughput sequencing (HTS) technologies provide opportunities to generate large amounts of sequence data and enable analyses of samples containing a mixture of DNA from multiple species/genotypes. We designed and tested an HTS approach for strain-level identification of gastrointestinal strongylids using ITS-2 metabarcoding at the MiSeq Illumina platform in samples from two free-ranging non-human primate species inhabiting the same environment, but differing significantly in their host traits and ecology. Although we observed overlapping of particular haplotypes, overall the studied primate species differed in their strongylid nematode community composition. Using HTS, we revealed hidden diversity in the strongylid nematode communities in non-human primates, more than one haplotype was found in more than 90% of samples and coinfections of more than one putative species occurred in 80% of samples. In conclusion, the HTS approach on strongylid nematodes, preferably using fecal samples, represents a time and cost-efficient way of studying strongylid communities and provides a resolution superior to traditional approaches.
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