Evidence map›Paper›PMID 29650589›Full record

ArticleDevelopment (Cambridge, England)2018

Direct activation of chordoblasts by retinoic acid is required for segmented centra mineralization during zebrafish spine development.

Hans-Martin Pogoda, Iris Riedl-Quinkertz, Heiko Löhr, Joshua S Waxman, Rodney M Dale, Jacek Topczewski, Stefan Schulte-Merker, Matthias Hammerschmidt

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. A Zebrafish Mutant in the Extracellular Matrix Protein GeneAnimals : an open access journal from MDPI · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Axial segmentation by iterative mechanical signaling.bioRxiv : the preprint server for biology · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Development of a straight vertebrate body axis.Development (Cambridge, England) · 2020
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Hans-Martin PogodaDepartment of Biology, Institute of Zoology - Developmental Biology, University of Cologne, 50674 Cologne, Germany pogodah@uni-koeln.de mhammers@uni-koeln.de.ORCID 0000-0003-3196-1720
Iris Riedl-QuinkertzDepartment of Biology, Institute of Zoology - Developmental Biology, University of Cologne, 50674 Cologne, Germany.
Heiko LöhrDepartment of Biology, Institute of Zoology - Developmental Biology, University of Cologne, 50674 Cologne, Germany.
Joshua S WaxmanMolecular Cardiovascular Biology Division, Cincinnati Children's Hospital Medical Center, Cincinnati, OH 45229, USA.ORCID 0000-0002-8132-487X
Rodney M DaleDepartment of Biology, Loyola University Chicago, Chicago, IL 60660, USA.ORCID 0000-0003-4255-4741
Jacek TopczewskiDepartment of Pediatrics, Northwestern University Feinberg School of Medicine, Chicago, IL 60611-2605, USA.ORCID 0000-0001-6023-9556
Stefan Schulte-MerkerInstitute of Cardiovascular Organogenesis and Regeneration, Faculty of Medicine, 48149 Münster, Germany.ORCID 0000-0003-3617-8807
Matthias HammerschmidtDepartment of Biology, Institute of Zoology - Developmental Biology, University of Cologne, 50674 Cologne, Germany pogodah@uni-koeln.de mhammers@uni-koeln.de.ORCID 0000-0002-3709-8166
University of Cologne · DECincinnati Children's Hospital Medical Center · USLoyola University Chicago · USNorthwestern University · USUniversity of Münster · DE

Funding

Systematic Vertebrate Functional GenomicsR01GM063904 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI EKKER, STEPHEN CARL · 2001 to 2025
$10.7M
Molecular Mechanisms of Atrial Development and RegenerationR01HL137766 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI Joshua Waxman · 2017 to 2026
$3.9M
Coup-tf dependent mechanisms of ventricular and hemangioblast specificationR01HL112893 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI WAXMAN, JOSHUA · 2013 to 2017
$1.7M
Retinoic acid-dependent epigenetic and transcriptional mechanisms controlling heart developmentR01HL141186 · NHLBI · CINCINNATI CHILDRENS HOSP MED CTR · PI WAXMAN, JOSHUA · 2018 to 2021
$1.6M
NHLBI NIH HHS R01 HL112893NHLBI NIH HHS R01 HL137766NHLBI NIH HHS R01 HL141186NIGMS NIH HHS R01 GM063904
6 · The paper itself

Abstract

Zebrafish mutants with increased retinoic acid (RA) signaling due to the loss of the RA-inactivating enzyme Cyp26b1 develop a hyper-mineralized spine with gradually fusing vertebral body precursors (centra). However, the underlying cellular mechanisms remain incompletely understood. Here, we show that cells of the notochord epithelium named chordoblasts are sensitive to RA signaling. Chordoblasts are uniformly distributed along the anteroposterior axis and initially generate the continuous collagenous notochord sheath. However, subsequently and iteratively, subsets of these cells undergo further RA-dependent differentiation steps, acquire a stellate-like shape, downregulate expression of the collagen gene

Indexed as

AnimalsCalcification, PhysiologicCollagenGene Expression Regulation, DevelopmentalNotochordRetinoic Acid 4-HydroxylaseSpineTretinoinZebrafishZebrafish ProteinsCollagencyp26b1 protein, zebrafishRetinoic Acid 4-HydroxylaseTretinoinZebrafish ProteinsCentraChordoblastNotochordRetinoic acidSpineVertebral bodyZebrafish

Identifiers

PMID29650589
PMCPMC5992598
OpenAlexW2797642843

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.