Evidence map›Paper›PMID 29644407›Full record

ArticleMicrobial ecology2018

Different Recovery Processes of Soil Ammonia Oxidizers from Flooding Disturbance.

Fei Ye, Mao-Hua Ma, Huub J M Op den Camp, Antonis Chatzinotas, Lei Li, Ming-Quan Lv, Sheng-Jun Wu, Yu Wang

Abstract read
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In one paragraph

Article in Microbial ecology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Fei YeChongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, Chongqing, 400714, China.
Mao-Hua MaChongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, Chongqing, 400714, China.
Huub J M Op den CampDepartment of Microbiology, IWWR, Radboud University Nijmegen, Nijmegen, 6525 AJ, the Netherlands.
Antonis ChatzinotasDepartment of Environmental Microbiology, Helmholtz Centre for Environmental Research-UFZ, 04318, Leipzig, Germany.
Lei LiBeijing Academy of Science and Technology, Beijing, 100048, China.
Ming-Quan LvChongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, Chongqing, 400714, China.
Sheng-Jun WuChongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, Chongqing, 400714, China. wsj@cigit.ac.cn.
Yu WangChongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, Chongqing, 400714, China. wangyu@cigit.ac.cn.ORCID http://orcid.org/0000-0001-6390-8444
Chongqing Institute of Green and Intelligent Technology · CNBeijing Academy of Science and Technology · CNHelmholtz Centre for Environmental Research · DERadboud University Nijmegen · NL

Funding

the National Natural Science Foundation of China 41301540the National Natural Science Foundation of China 41303053the National Natural Science Foundation of China 41571497
6 · The paper itself

Abstract

Understanding how microorganisms respond to environmental disturbance is one of the key focuses in microbial ecology. Ammonia-oxidizing bacteria (AOB) and archaea (AOA) are responsible for ammonia oxidation which is a crucial step in the nitrogen cycle. Although the physiology, distribution, and activity of AOA and AOB in soil have been extensively investigated, their recovery from a natural disturbance remains largely unknown. To assess the recovery capacities, including resistance and resilience, of AOA and AOB, soil samples were taken from a reservoir riparian zone which experienced periodically water flooding. The samples were classified into three groups (flooding, recovery, and control) for a high-throughput sequencing and quantitative PCR analysis. We used a relative quantitative index of both the resistance (RS) and resilience (RL) to assess the variation of gene abundance, alpha-diversity, and community composition. The AOA generally demonstrated a better recovery capability after the flooding disturbance compared to AOB. In particular, AOA were more resilient after the flooding disturbance. Taxa within the AOA and AOB showed different RS and RL values, with the most abundant taxa showing in general the highest RS indices. Soil NH

Indexed as

FloodsMicrobiotaSoil MicrobiologyAmmoniaArchaeaBacteriaChinaGenes, ArchaealGenes, BacterialOxidation-ReductionAmmoniaAmmonia-oxidizing communitiesArchaeaResilienceResistanceResponseRiparian zone

Identifiers

PMID29644407
OpenAlexW2797411314

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.