Evidence map›Paper›PMID 29644095›Full record

ArticleNPJ genomic medicine2018

Rapid whole-genome sequencing decreases infant morbidity and cost of hospitalization.

Lauge Farnaes, Amber Hildreth, Nathaly M Sweeney, Michelle M Clark, Shimul Chowdhury, Shareef Nahas, Julie A Cakici, Wendy Benson, Robert H Kaplan, Richard Kronick and 7 more

Abstract read
In one paragraph

Article in NPJ genomic medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 255 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
255citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

255 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. A systematic review of the methodological quality of economic evaluations in genetic screening and testing for monogenic disorders.Genetics in medicine : official journal of the American College of Medical Genetics · 2022
    Pooled it
  5. Trial
  6. Trial
  7. Article
  8. Observational
  9. Article
  10. Rapid genomic sequencing in the NICU: Who to test and why.European journal of human genetics : EJHG · 2026
    Review
  11. Efficacy of universal genome sequencing in infant extracorporeal membrane oxygenation.Journal of perinatology : official journal of the California Perinatal Association · 2026
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

195 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Lauge Farnaes *Rady Children's Institute for Genomic Medicine, San Diego, CA USA.
Amber Hildreth *Rady Children's Institute for Genomic Medicine, San Diego, CA USA.
Nathaly M Sweeney *Rady Children's Institute for Genomic Medicine, San Diego, CA USA.
Michelle M ClarkRady Children's Institute for Genomic Medicine, San Diego, CA USA.
Shimul ChowdhuryRady Children's Institute for Genomic Medicine, San Diego, CA USA.
Shareef NahasRady Children's Institute for Genomic Medicine, San Diego, CA USA.
Julie A CakiciRady Children's Institute for Genomic Medicine, San Diego, CA USA.ORCID 0000-0001-5672-3396
Wendy BensonRady Children's Institute for Genomic Medicine, San Diego, CA USA.
Robert H KaplanTorrey Pines Health Group Inc., San Diego, CA USA.
Richard Kronick4Department of Family Medicine and Public Health, University of California San Diego, San Diego, CA USA.
Matthew N BainbridgeRady Children's Institute for Genomic Medicine, San Diego, CA USA.
Jennifer FriedmanRady Children's Institute for Genomic Medicine, San Diego, CA USA.
Jeffrey J GoldRady Children's Institute for Genomic Medicine, San Diego, CA USA.
Yan DingRady Children's Institute for Genomic Medicine, San Diego, CA USA.
Narayanan VeeraraghavanRady Children's Institute for Genomic Medicine, San Diego, CA USA.
David DimmockRady Children's Institute for Genomic Medicine, San Diego, CA USA.
Stephen F KingsmoreRady Children's Institute for Genomic Medicine, San Diego, CA USA.

Funding

ConProject-001U19HD077693 · NICHD · RADY PEDIATRIC GENOMICS & SYSTEMS MEDICINE INSTITUTE · PI KINGSMORE, STEPHEN FRANCIS · 2013 to 2018
$6.2M
Genomic and Environmental Determinants of Infant Deaths in San Diego County in 2015-2022R01HD101540 · NICHD · RADY PEDIATRIC GENOMICS & SYSTEMS MEDICINE INSTITUTE · PI CHAMBERS, CHRISTINA, KINGSMORE, STEPHEN FRANCIS · 2020 to 2024
$3.5M
NICHD NIH HHS R01 HD101540NICHD NIH HHS U19 HD077693
6 · The paper itself

Abstract

Genetic disorders are a leading cause of morbidity and mortality in infants. Rapid whole-genome sequencing (rWGS) can diagnose genetic disorders in time to change acute medical or surgical management (clinical utility) and improve outcomes in acutely ill infants. We report a retrospective cohort study of acutely ill inpatient infants in a regional children's hospital from July 2016-March 2017. Forty-two families received rWGS for etiologic diagnosis of genetic disorders. Probands also received standard genetic testing as clinically indicated. Primary end-points were rate of diagnosis, clinical utility, and healthcare utilization. The latter was modelled in six infants by comparing actual utilization with matched historical controls and/or counterfactual utilization had rWGS been performed at different time points. The diagnostic sensitivity of rWGS was 43% (eighteen of 42 infants) and 10% (four of 42 infants) for standard genetic tests (

Identifiers

PMID29644095
PMCPMC5884823

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.