Evidence map›Paper›PMID 29643985›Full record

ArticleOncotarget2018

Replication-incompetent gammaretroviral and lentiviral vector-based insertional mutagenesis screens identify prostate cancer progression genes.

Victor M Bii, Casey P Collins, Jonah D Hocum, Grant D Trobridge

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. The role of TAOK3 in cancer progression and development as a prognostic marker: A pan-cancer analysis study.Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society · 2024
    Article
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  5. Article
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  7. The Diverse Roles of TAO Kinases in Health and Diseases.International journal of molecular sciences · 2020
    Review
  8. Review
  9. Article
  10. Review
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  12. The Role of Nonerythroid SpectrinJournal of oncology · 2019
    Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Victor M BiiCollege of Pharmacy, Washington State University, Spokane 99210, WA, USA.
Casey P CollinsCollege of Pharmacy, Washington State University, Spokane 99210, WA, USA.
Jonah D HocumCollege of Pharmacy, Washington State University, Spokane 99210, WA, USA.
Grant D TrobridgeCollege of Pharmacy, Washington State University, Spokane 99210, WA, USA.
Washington State University Spokane · US

Funding

Mutagenesis Screen for Prostate CancerR15CA173598 · NCI · WASHINGTON STATE UNIVERSITY · PI TROBRIDGE, GRANT D · 2013 to 2013
$418k
NCI NIH HHS R15 CA173598
6 · The paper itself

Abstract

Replication-incompetent gammaretroviral (γRV) and lentiviral (LV) vectors have both been used in insertional mutagenesis screens to identify cancer drivers. In this approach the vectors stably integrate in the host cell genome and induce cancers by dysregulating nearby genes. The cells that contain a retroviral vector provirus in or near a proto-oncogene or tumor suppressor are preferentially enriched in a tumor. γRV and LV vectors have different integration profiles and genotoxic potential, making them potentially complementary tools for insertional mutagenesis screens. We performed screens using both γRV and LV vectors to identify driver genes that mediate progression of androgen-independent prostate cancer (AIPC) using a xenotransplant mouse model. Vector transduced LNCaP cells were injected orthotopically into the prostate gland of immunodeficient mice. Mice that developed tumors were castrated to create an androgen-deficient environment and metastatic tumors that developed were analyzed. A high-throughput modified genomic sequencing PCR (MGS-PCR) approach identified the positions of vector integrations in these metastatic tumors.

Indexed as

Chromosomedriver genesgammaretroviral (γRV) vectorinsertional mutagenesis screenlentiviral (LV) vectorprostate cancer (PC)

Identifiers

PMID29643985
PMCPMC5884640
OpenAlexW2791455006

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.