Evidence map›Paper›PMID 29643377›Full record

ArticleNature communications2018

Molecular basis for the folding of β-helical autotransporter passenger domains.

Xiaojun Yuan, Matthew D Johnson, Jing Zhang, Alvin W Lo, Mark A Schembri, Lakshmi C Wijeyewickrema, Robert N Pike, Gerard H M Huysmans, Ian R Henderson, Denisse L Leyton

Abstract read
In one paragraph

Article in Nature communications, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. SeaB is a conservedInfection and immunity · 2026
    Article
  2. Article
  3. EnteroaggregativeEcoSal Plus · 2025
    Review
  4. Article
  5. Article
  6. Article
  7. Article
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  9. Article
  10. Article
  11. Protein import and export across the bacterial outer membrane.Current opinion in structural biology · 2021
    Review
  12. Review
  13. Article
  14. The rhizobial autotransporter determines the symbiotic nitrogen fixation activity ofProceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xiaojun YuanResearch School of Biology, Australian National University, Canberra, ACT, 0200, Australia.
Matthew D JohnsonResearch School of Biology, Australian National University, Canberra, ACT, 0200, Australia.
Jing ZhangResearch School of Biology, Australian National University, Canberra, ACT, 0200, Australia.
Alvin W LoSchool of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, 4072, Australia.
Mark A SchembriSchool of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, 4072, Australia.ORCID http://orcid.org/0000-0003-4863-9260
Lakshmi C WijeyewickremaDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, 3086, Australia.
Robert N PikeDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Melbourne, VIC, 3086, Australia.
Gerard H M HuysmansDepartment of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, 10065, USA.
Ian R HendersonInstitute of Microbiology and Infection, University of Birmingham, Birmingham, B15 2TT, UK.
Denisse L LeytonResearch School of Biology, Australian National University, Canberra, ACT, 0200, Australia. denisse.leyton@anu.edu.au.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial autotransporters comprise a C-terminal β-barrel domain, which must be correctly folded and inserted into the outer membrane to facilitate translocation of the N-terminal passenger domain to the cell exterior. Once at the surface, the passenger domains of most autotransporters are folded into an elongated β-helix. In a cellular context, key molecules catalyze the assembly of the autotransporter β-barrel domain. However, how the passenger domain folds into its functional form is poorly understood. Here we use mutational analysis on the autotransporter Pet to show that the β-hairpin structure of the fifth extracellular loop of the β-barrel domain has a crucial role for passenger domain folding into a β-helix. Bioinformatics and structural analyses, and mutagenesis of a homologous autotransporter, suggest that this function is conserved among autotransporter proteins with β-helical passenger domains. We propose that the autotransporter β-barrel domain is a folding vector that nucleates folding of the passenger domain.

Indexed as

Amino Acid SequenceBacterial ToxinsBinding SitesCloning, MolecularCrystallography, X-RayEnterotoxinsEscherichia coliEscherichia coli ProteinsGene ExpressionGenetic VectorsKineticsModels, MolecularProtein BindingProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandProtein FoldingBacterial ToxinsEnterotoxinsEscherichia coli ProteinsEspP protein, E coliPet protein, E coliRecombinant ProteinsSerine EndopeptidasesType V Secretion Systems

Identifiers

PMID29643377
PMCPMC5895577

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.