Evidence map›Paper›PMID 29643198›Full record

ArticleJournal of clinical microbiology2018

Development of a Real-Time Reverse Transcription-PCR Assay for Global Differentiation of Yellow Fever Virus Vaccine-Related Adverse Events from Natural Infections.

Holly R Hughes, Brandy J Russell, Eric C Mossel, John Kayiwa, Julius Lutwama, Amy J Lambert

Abstract read
In one paragraph

Article in Journal of clinical microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
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  9. Yellow fever in the diagnostics laboratory.Emerging microbes & infections · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Holly R HughesCenters for Disease Control and Prevention, Fort Collins, Colorado, USA LTR8@cdc.gov.
Brandy J RussellCenters for Disease Control and Prevention, Fort Collins, Colorado, USA.
Eric C MosselCenters for Disease Control and Prevention, Fort Collins, Colorado, USA.
John KayiwaUganda Virus Research Institute, Entebbe, Uganda.
Julius LutwamaUganda Virus Research Institute, Entebbe, Uganda.
Amy J LambertCenters for Disease Control and Prevention, Fort Collins, Colorado, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yellow fever (YF) is a reemerging public health threat, with frequent outbreaks prompting large vaccination campaigns in regions of endemicity in Africa and South America. Specific detection of vaccine-related adverse events is resource-intensive, time-consuming, and difficult to achieve during an outbreak. To address this, we have developed a highly transferable rapid yellow fever virus (YFV) vaccine-specific real-time reverse transcription-PCR (RT-PCR) assay that distinguishes vaccine from wild-type lineages. The assay utilizes a specific hydrolysis probe that includes locked nucleic acids to enhance specific discrimination of the YFV17D vaccine strain genome. Promisingly, sensitivity and specificity analyses reveal this assay to be highly specific to vaccine strain(s) when tested on clinical samples and YFV cell culture isolates of global origin. Taken together, our data suggest the utility of this assay for use in laboratories of varied capacity for the identification and differentiation of vaccine-related adverse events from wild-type infections of both African and South American origin.

Indexed as

Cell Culture TechniquesDNA PrimersGenome, ViralHumansOligonucleotidesReal-Time Polymerase Chain ReactionSensitivity and SpecificityYellow FeverYellow Fever VaccineYellow fever virusDNA Primerslocked nucleic acidOligonucleotidesYellow Fever Vaccine17D vaccinediagnosticlocked nucleic acidsreal-time RT-PCRyellow fever virus

Identifiers

PMID29643198
PMCPMC5971556

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.