Evidence map›Paper›PMID 29642854›Full record

ArticleBMC genomics2018

Comparative transcriptome analysis of hypothalamus-regulated feed intake induced by exogenous visfatin in chicks.

Zhuanjian Li, Xuelian Liu, Panpan Zhang, Ruili Han, Guirong Sun, Ruirui Jiang, Yanbin Wang, Xiaojun Liu, Wenya Li, Xiangtao Kang and 1 more

Abstract readComparative Study
In one paragraph

Article in BMC genomics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Zhuanjian LiCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.ORCID http://orcid.org/0000-0002-7595-0604
Xuelian LiuCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.
Panpan ZhangCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.
Ruili HanCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.
Guirong SunCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.
Ruirui JiangCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.
Yanbin WangCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.
Xiaojun LiuCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.
Wenya LiCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.
Xiangtao KangCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China.
Yadong TianCollege of Animal Science and Veterinary Medicine, Henan Agricultural University, Zhengzhou, 450002, China. ydtian111@163.com.

Funding

Key Science and Technology Research Project of Henan Province 172102110045National Natural Science Foundation of China 31372330NSFC-Henan joint grant U1704233Program for Innovation Research Team of Ministry of Education IRT16R23
6 · The paper itself

Abstract

backgroundThe intracerebroventricular injection of visfatin increases feed intake. However, little is known about the molecular mechanism in chicks. This study was conducted to assess the effect of visfatin on the feeding behavior of chicks and the associated molecular mechanism.

resultsIn response to the intraventricular injection of 40 ng and 400 ng visfatin, feed intake in chicks was significantly increased, and the concentrations of glucose, insulin, TG, HDL and LDL were significantly altered. Using RNA-seq, we identified DEGs in the chick hypothalamus at 60 min after injection with various doses of visfatin. In total, 325, 85 and 519 DEGs were identified in the treated chick hypothalamus in the LT vs C, HT vs C and LT vs HT comparisons, respectively. The changes in the expression profiles of DEGs, GO functional categories, KEGG pathways, and PPI networks by visfatin-mediated regulation of feed intake were analyzed. The DEGs were grouped into 8 clusters based on their expression patterns via K-mean clustering; there were 14 appetite-related DEGs enriched in the hormone activity GO term. The neuroactive ligand-receptor interaction pathway was the key pathway affected by visfatin. The PPI analysis of DEGs showed that POMC was a hub gene that interacted with the maximum number of nodes and ingestion-related pathways, including POMC, CRH, AgRP, NPY, TRH, VIP, NPYL, CGA and TSHB.

conclusionThese common DEGs were enriched in the hormone activity GO term and the neuroactive ligand-receptor interaction pathway. Therefore, visfatin causes hyperphagia via the POMC/CRH and NPY/AgRP signaling pathways. These results provide valuable information about the molecular mechanisms of the regulation of food intake by visfatin.

Indexed as

TranscriptomeAnimalsChickensCluster AnalysisEatingFeeding BehaviorGene Expression ProfilingGene OntologyHormonesHypothalamusInjections, IntraventricularNicotinamide PhosphoribosyltransferaseProtein Interaction MappingReal-Time Polymerase Chain ReactionRNA, MessengerSequence Analysis, RNAHormonesNicotinamide PhosphoribosyltransferaseRNA, MessengerDEGsFeed intakeHypothalamusTranscriptomicsVisfatin

Identifiers

PMID29642854
PMCPMC5896085

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.