Evidence map›Paper›PMID 29642852›Full record

ArticleBMC evolutionary biology2018

Parapatric genetic divergence among deep evolutionary lineages in the Mediterranean green crab, Carcinus aestuarii (Brachyura, Portunoidea, Carcinidae), accounts for a sharp phylogeographic break in the Eastern Mediterranean.

Temim Deli, Evrim Kalkan, Selahattin Ünsal Karhan, Sonya Uzunova, Alireza Keikhosravi, Raşit Bilgin, Christoph D Schubart

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 5 countries.

Temim DeliLaboratory of Genetics, Biodiversity and Enhancement of Bioresources (LR11ES41), University of Monastir, Higher Institute of Biotechnology of Monastir, Av. Tahar Hadded, B.P. 74, 5000, Monastir, Tunisia.
Evrim KalkanMiddle East Technical University, Institute of Marine Sciences, P.O.Box 28, 33731, Erdemli-Mersin, Turkey.
Selahattin Ünsal Karhan, 19 Mayis Mah., Gürsoylu Sok., Zambak Apt. No: 39/1, Kadiköy, 34736, Istanbul, Turkey.
Sonya UzunovaInstitute of Fish Resources - Varna, Agricultural Academy, Primorski, 4 blvd, 9000, Varna, Bulgaria.
Alireza KeikhosraviDepartment of Biology, Hakim Sabzevari University, Sabzevar, Iran.
Raşit BilginInstitute of Environmental Sciences, Boğaziçi University, Bebek, 34342, Istanbul, Turkey.
Christoph D SchubartZoology & Evolutionary Biology, Universität Regensburg, D-93040, Regensburg, Germany. Christoph.Schubart@ur.de.
Agricultural Academy · BGBoğaziçi University · TRHakim Sabzevari University · IRMiddle East Technical University · TRUniversity of Monastir · TNUniversity of Regensburg · DE

Funding

Deutscher Akademischer Austauschdienst PPP program, D/08/02059Research Fund of Boğaziçi University in Istanbul 09S101
6 · The paper itself

Abstract

backgroundRecently, population genetic studies of Mediterranean marine species highlighted patterns of genetic divergence and phylogeographic breaks, due to the interplay between impacts of Pleistocene climate shifts and contemporary hydrographical barriers. These factors markedly shaped the distribution of marine organisms and their genetic makeup. The present study is part of an ongoing effort to understand the phylogeography and evolutionary history of the highly dispersive Mediterranean green crab, Carcinus aestuarii (Nardo, 1847), across the Mediterranean Sea. Recently, marked divergence between two highly separated haplogroups (genetic types I and II) of C. aestuarii was discerned across the Siculo-Tunisian Strait, suggesting an Early Pleistocene vicariant event. In order to better identify phylogeographic patterns in this species, a total of 263 individuals from 22 Mediterranean locations were analysed by comparing a 587 basepair region of the mitochondrial gene Cox1 (cytochrome oxidase subunit 1). The examined dataset is composed of both newly generated sequences (76) and previously investigated ones (187).

resultsOur results unveiled the occurrence of a highly divergent haplogroup (genetic type III) in the most north-eastern part of the Mediterranean Sea. Divergence between the most distinct type III and the common ancestor of both types I and II corresponds to the Early Pleistocene and coincides with the historical episode of separation between types I and II. Our results also revealed strong genetic divergence among adjacent regions (separating the Aegean and Marmara seas from the remaining distribution zone) and confirmed a sharp phylogeographic break across the Eastern Mediterranean. The recorded parapatric genetic divergence, with the potential existence of a contact zone between both groups in the Ionian Sea and notable differences in the demographic history, suggest the likely impact of paleoclimatic events, as well as past and contemporary oceanographic processes, in shaping genetic variability of this species.

conclusionsOur findings not only provide further evidence for the complex evolutionary history of the green crab in the Mediterranean Sea, but also stress the importance of investigating peripheral areas in the species' distribution zone in order to fully understand the distribution of genetic diversity and unravel hidden genetic units and local patterns of endemism.

Indexed as

AnimalsBiological EvolutionBrachyuraCyclooxygenase 1DNA, MitochondrialGenetic DriftGenetic VariationMediterranean SeaPhylogenyPhylogeographySequence Analysis, DNACyclooxygenase 1DNA, MitochondrialBiogeographic boundariesCrustaceaEvolutionary historyMediterranean SeaMitochondrial DNAPopulation genetics

Identifiers

PMID29642852
PMCPMC5896055
OpenAlexW2804957183

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.