Evidence map›Paper›PMID 29642370›Full record

ArticleInternational journal of molecular sciences2018

Global Transcriptome Analysis of Brown Adipose Tissue of Diet-Induced Obese Mice.

Jingyi Cao, Qi Zhu, Lin Liu, Bradley J Glazier, Benjamin C Hinkel, Chun Liang, Haifei Shi

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Thermogenic Adipose ADH5 Counteracts Age-related Metabolic Decline.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Eugenol inhibits preadipocyte differentiation and lipid accumulation via upregulating ATF3.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Calcium Signaling Pathways: Key Pathways in the Regulation of Obesity.International journal of molecular sciences · 2019
    Review
  15. Review
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jingyi CaoProgram of Physiology and Neuroscience, Department of Biology, Miami University, Oxford, OH 45056, USA. caoj2@miamioh.edu.
Qi ZhuProgram of Physiology and Neuroscience, Department of Biology, Miami University, Oxford, OH 45056, USA. zhuq2@miamioh.edu.
Lin LiuProgram of Bioinformatics, Department of Biology, Miami University, Oxford, OH 45056, USA. liul2@miamioh.edu.
Bradley J GlazierProgram of Physiology and Neuroscience, Department of Biology, Miami University, Oxford, OH 45056, USA. glazieb2@miamioh.edu.
Benjamin C HinkelProgram of Physiology and Neuroscience, Department of Biology, Miami University, Oxford, OH 45056, USA. hinkelbc@miamioh.edu.
Chun LiangProgram of Bioinformatics, Department of Biology, Miami University, Oxford, OH 45056, USA. liangc@miamioh.edu.
Haifei ShiProgram of Physiology and Neuroscience, Department of Biology, Miami University, Oxford, OH 45056, USA. shih@miamioh.edu.ORCID 0000-0002-9523-7742
Miami University · US

Funding

Central Action of Brain-Derived Neurotrophic Factor in Male and Female RatsR15DK090823 · NIDDK · MIAMI UNIVERSITY OXFORD · PI SHI, HAIFEI · 2010 to 2015
$816k
NIDDK NIH HHS R15 DK090823
6 · The paper itself

Abstract

Consumption of a high-fat diet (HFD) promotes the development of obesity, a disease resulting from an imbalance between energy intake and energy expenditure. Brown adipose tissue (BAT) has thermogenic capacity that burns calories to produce heat, and it is a potential target for the treatment and prevention of obesity. There is limited information regarding the impact of HFD on the BAT transcriptome. We hypothesized that HFD-induced obesity would lead to transcriptional regulation of BAT genes. RNA sequencing was used to generate global transcriptome profiles from BAT of lean mice fed with a low-fat diet (LFD) and obese mice fed with a HFD. Gene Ontology (GO) analysis identified increased expression of genes involved in biological processes (BP) related to immune responses, which enhanced molecular function (MF) in chemokine activity; decreased expression of genes involved in BP related to ion transport and muscle structure development, which reduced MF in channel and transporter activity and structural binding. Kyoto Encyclopedia of Genes and Genomes (KEGG) functional pathway analysis indicated that pathways associated with innate immunity were enhanced by HFD, while pathways associated with muscle contraction and calcium signaling were suppressed by HFD. Collectively, these results suggest that diet-induced obesity changes transcriptomic signatures of BAT, leading to dysfunction involving inflammation, calcium signaling, ion transport, and cell structural development.

Indexed as

TranscriptomeAdipose Tissue, BrownAnimalsDiet, High-FatGene Expression ProfilingMaleMiceMice, Inbred C57BLObesitybrown adipose tissuecalcium signalinghigh-fat dietinflammationion transportmuscle system processRNA sequencing

Identifiers

PMID29642370
PMCPMC5979511
OpenAlexW2795827081

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.