Evidence map›Paper›PMID 29642044›Full record

ReviewCurrent opinion in neurobiology2018

High-speed 3D imaging of cellular activity in the brain using axially-extended beams and light sheets.

Elizabeth Mc Hillman, Venkatakaushik Voleti, Kripa Patel, Wenze Li, Hang Yu, Citlali Perez-Campos, Sam E Benezra, Randy M Bruno, Pubudu T Galwaduge

Abstract readReview
In one paragraph

Review in Current opinion in neurobiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
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  5. Article
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  7. Article
  8. Neuromuscular basis ofProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  9. Article
  10. Recent advances in oblique plane microscopy.Nanophotonics (Berlin, Germany) · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Genetically Encoded Voltage Indicators.Advances in experimental medicine and biology · 2021
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Elizabeth Mc HillmanLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA. Electronic address: Elizabeth.hillman@columbia.edu.
Venkatakaushik VoletiLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
Kripa PatelLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
Wenze LiLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
Hang YuLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
Citlali Perez-CamposLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.
Sam E BenezraMortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA; Bruno Lab, Department of Neuroscience, Columbia University, New York, NY, USA.
Randy M BrunoMortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA; Bruno Lab, Department of Neuroscience, Columbia University, New York, NY, USA.
Pubudu T GalwadugeLaboratory for Functional Optical Imaging, Departments of Biomedical Engineering and Radiology, Columbia University, New York, NY, USA; Mortimer B. Zuckerman Mind Brain Behavior Institute, Columbia University, New York, NY, USA.

Funding

Modeling multi-area dynamics during motor controlU19NS104649 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI COSTA, RUI M. · 2017 to 2021
$15.3M
Instrumentation, Fabrication, and Design CoreP30EY019007 · NEI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Xin Zhang · 2010 to 2026
$12.9M
SCAPE microscopy for high-speed 3D imaging of cellular function in behaving animals: Continued innovation, optimization, and disseminationUF1NS108213 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HILLMAN, ELIZABETH M. C. · 2018 to 2018
$3.5M
Mechanisms of second heart field development regulated by Nkx genesR01HL131438 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI TARGOFF, KIMARA L · 2017 to 2021
$2.1M
SCAPE microscopy for high-speed in-vivo volumetric microscopy in behaving organismsU01NS094296 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HILLMAN, ELIZABETH M. C. · 2015 to 2017
$2.0M
NEI NIH HHS P30 EY019007NHLBI NIH HHS R01 HL131438NINDS NIH HHS U01 NS094296NINDS NIH HHS U19 NS104649NINDS NIH HHS UF1 NS108213
6 · The paper itself

Abstract

As optical reporters and modulators of cellular activity have become increasingly sophisticated, the amount that can be learned about the brain via high-speed cellular imaging has increased dramatically. However, despite fervent innovation, point-scanning microscopy is facing a fundamental limit in achievable 3D imaging speeds and fields of view. A range of alternative approaches are emerging, some of which are moving away from point-scanning to use axially-extended beams or sheets of light, for example swept confocally aligned planar excitation (SCAPE) microscopy. These methods are proving effective for high-speed volumetric imaging of the nervous system of small organisms such as Drosophila (fruit fly) and D. Rerio (Zebrafish), and are showing promise for imaging activity in the living mammalian brain using both single and two-photon excitation. This article describes these approaches and presents a simple model that demonstrates key advantages of axially-extended illumination over point-scanning strategies for high-speed volumetric imaging, including longer integration times per voxel, improved photon efficiency and reduced photodamage.

Indexed as

AnimalsBrainHumansImaging, Three-DimensionalLightingMicroscopy, ConfocalModels, TheoreticalNeurons

Identifiers

PMID29642044
PMCPMC6002850

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.