Evidence map›Paper›PMID 29636506›Full record

ArticleScientific reports2018

Meta-scale mountain grassland observatories uncover commonalities as well as specific interactions among plant and non-rhizosphere soil bacterial communities.

Erika Yashiro, Eric Pinto-Figueroa, Aline Buri, Jorge E Spangenberg, Thierry Adatte, Helene Niculita-Hirzel, Antoine Guisan, Jan Roelof van der Meer

Abstract read
In one paragraph

Article in Scientific reports, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Erika YashiroDepartment of Fundamental Microbiology, University of Lausanne, 1015, Lausanne, Switzerland.
Eric Pinto-FigueroaDepartment of Ecology and Evolution, University of Lausanne, 1015, Lausanne, Switzerland.
Aline BuriInstitute of Earth Surface Dynamics, University of Lausanne, 1015, Lausanne, Switzerland.
Jorge E SpangenbergInstitute of Earth Surface Dynamics, University of Lausanne, 1015, Lausanne, Switzerland.
Thierry AdatteInstitute of Earth Sciences, University of Lausanne, 1015, Lausanne, Switzerland.
Helene Niculita-HirzelInstitute for Work and Health, University of Lausanne and Geneva, 1066, Epalinges, Lausanne, Switzerland.ORCID 0000-0003-1467-8819
Antoine GuisanDepartment of Ecology and Evolution, University of Lausanne, 1015, Lausanne, Switzerland.
Jan Roelof van der MeerDepartment of Fundamental Microbiology, University of Lausanne, 1015, Lausanne, Switzerland. janroelof.vandermeer@unil.ch.ORCID 0000-0003-1485-3082

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interactions between plants and bacteria in the non-rhizosphere soil are rarely assessed, because they are less direct and easily masked by confounding environmental factors. By studying plant vegetation alliances and soil bacterial community co-patterning in grassland soils in 100 sites across a heterogeneous mountain landscape in the western Swiss Alps, we obtained sufficient statistical power to disentangle common co-occurrences and weaker specific interactions. Plant alliances and soil bacterial communities tended to be synchronized in community turnover across the landscape, largely driven by common underlying environmental factors, such as soil pH or elevation. Certain alliances occurring in distinct, local, environmental conditions were characterized by co-occurring specialist plant and bacterial species, such as the Nardus stricta and Thermogemmatisporaceae. In contrast, some generalist taxa, like Anthoxanthum odoratum and 19 Acidobacteria species, spanned across multiple vegetation alliances. Meta-scale analyses of soil bacterial community composition and vegetation surveys, complemented with local edaphic measurements, can thus prove useful to identify the various types of plant-bacteria interactions and the environments in which they occur.

Indexed as

BacteriaGrasslandSoilSoil MicrobiologyBacterial Physiological PhenomenaBiodiversityPlant Physiological PhenomenaPlantsSoil

Identifiers

PMID29636506
PMCPMC5893626

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.