Evidence map›Paper›PMID 29636367›Full record

ArticleMolecular cancer therapeutics2018

Disruption of

Nam Bui, Justin K Huang, Ana Bojorquez-Gomez, Katherine Licon, Kyle S Sanchez, Sean N Tang, Alex N Beckett, Tina Wang, Wei Zhang, John Paul Shen and 2 more

Abstract read
In one paragraph

Article in Molecular cancer therapeutics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Life (Basel, Switzerland) · 2022
    Article
  16. The role of NSD1, NSD2, and NSD3 histone methyltransferases in solid tumors.Cellular and molecular life sciences : CMLS · 2022
    Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Nam Bui *Department of Medicine, UC San Diego, La Jolla, California.
Justin K Huang *Bioinformatics and Systems Biology Program, UC San Diego, La Jolla, California.
Ana Bojorquez-GomezDepartment of Medicine, UC San Diego, La Jolla, California.
Katherine LiconDepartment of Medicine, UC San Diego, La Jolla, California.
Kyle S SanchezDepartment of Medicine, UC San Diego, La Jolla, California.
Sean N TangDepartment of Medicine, UC San Diego, La Jolla, California.
Alex N BeckettDepartment of Medicine, UC San Diego, La Jolla, California.
Tina WangDepartment of Medicine, UC San Diego, La Jolla, California.ORCID 0000-0002-8035-3134
Wei ZhangDepartment of Medicine, UC San Diego, La Jolla, California.
John Paul Shen *Department of Medicine, UC San Diego, La Jolla, California. tideker@ucsd.edu jpshen@ucsd.edu jkreisberg@ucsd.edu.
Jason F KreisbergDepartment of Medicine, UC San Diego, La Jolla, California. tideker@ucsd.edu jpshen@ucsd.edu jkreisberg@ucsd.edu.
Trey IdekerDepartment of Medicine, UC San Diego, La Jolla, California. tideker@ucsd.edu jpshen@ucsd.edu jkreisberg@ucsd.edu.

Funding

SYNTHETIC SYSTEMSP50GM085764 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HASTY, JEFF M, IDEKER, TREY · 2010 to 2018
$23.3M
TR&D 3 - Network Guided Machine LearningP41GM103504 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI IDEKER, TREY · 2012 to 2024
$17.3M
Using Networks to Seed Hierarchical Whole-cell Models of CancerU54CA209891 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KROGAN, NEVAN J · 2017 to 2021
$10.9M
Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
A Systems Approach to Mapping the DNA Damage ResponseR01ES014811 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI IDEKER, TREY · 2005 to 2021
$8.6M
GRADUATE TRAINING PROGRAM IN BIONFORMATICST32GM008806 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BAFNA, VINEET, REN, BING · 2001 to 2020
$6.2M
NDEx - the Network Data Exchange A Network Commons for BiologistsU24CA184427 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PRATT, DEXTER · 2014 to 2021
$5.7M
NCI NIH HHS L30 CA171000NCI NIH HHS U24 CA184427NCI NIH HHS U54 CA209891NIEHS NIH HHS R01 ES014811NIGMS NIH HHS P41 GM103504NIGMS NIH HHS P50 GM085764NIGMS NIH HHS T32 GM008666NIGMS NIH HHS T32 GM008806
6 · The paper itself

Abstract

Human papillomavirus (HPV)-negative head and neck squamous cell carcinoma (HNSCC) represents a distinct classification of cancer with worse expected outcomes. Of the 11 genes recurrently mutated in HNSCC, we identify a singular and substantial survival advantage for mutations in the gene encoding Nuclear Set Domain Containing Protein 1 (

Indexed as

Carcinoma, Squamous CellCell Line, TumorCisplatinCpG IslandsCRISPR-Cas SystemsDNA MethylationDrug Resistance, NeoplasmFemaleGene Expression Regulation, NeoplasticHead and Neck NeoplasmsHistone-Lysine N-MethyltransferaseHistone MethyltransferasesHumansIntracellular Signaling Peptides and ProteinsMaleMutationCisplatinHistone-Lysine N-MethyltransferaseHistone MethyltransferasesIntracellular Signaling Peptides and ProteinsNSD1 protein, humanNuclear Proteins

Identifiers

PMID29636367
PMCPMC6030464

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.