Evidence map›Paper›PMID 29634773›Full record

ArticlePloS one2018

Acidic pH triggers the phosphorylation of the response regulator NtrX in alphaproteobacteria.

Ignacio Fernández, Gabriela Sycz, Fernando Alberto Goldbaum, Mariela Del Carmen Carrica

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ignacio FernándezFundación Instituto Leloir, IIBBA-CONICET, Patricias Argentinas, Buenos Aires, Argentina.
Gabriela SyczFundación Instituto Leloir, IIBBA-CONICET, Patricias Argentinas, Buenos Aires, Argentina.
Fernando Alberto GoldbaumFundación Instituto Leloir, IIBBA-CONICET, Patricias Argentinas, Buenos Aires, Argentina.
Mariela Del Carmen CarricaFundación Instituto Leloir, IIBBA-CONICET, Patricias Argentinas, Buenos Aires, Argentina.ORCID 0000-0001-6729-3045
Consejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Many signaling pathways that control cellular development, cell-cycle progression and nutritional versatility have been studied in Caulobacter crescentus. For example, it was suggested that the response regulator NtrX is conditionally essential for this bacterium and that it might be necessary for responding to a signal produced in phosphate-replete minimal medium. However, such signal has not been identified yet and the role of NtrX in C. crescentus biology remains elusive. Here, using wild-type C. crescentus and a strain with a chromosomally myc-tagged ntrX gene, we demonstrate that high concentrations of phosphate (10 mM) regulate ntrX transcription and the abundance of the protein. We also show that the pH of the medium acts as a switch able to regulate the phosphorylation status of NtrX, promoting its phosphorylation under mildly acidic conditions and its dephosphorylation at neutral pH. Moreover, we demonstrate that the ntrX gene is required for survival in environments with low pH and under acidic stress. Finally, we prove that NtrX phosphorylation is also triggered by low pH in Brucella abortus, a pathogenic alphaproteobacterium. Overall, our work contributes to deepen the general knowledge of this system and provides tools to elucidate the NtrX regulon.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsBrucella abortusCaulobacter crescentusGene DeletionHydrogen-Ion ConcentrationPhosphatesPhosphorylationPromoter Regions, GeneticProteolysisRegulonSignal TransductionStress, PhysiologicalTemperatureBacterial ProteinsPhosphates

Identifiers

PMID29634773
PMCPMC5892882
OpenAlexW2796801431

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.