Evidence map›Paper›PMID 29634682›Full record

ReviewNature medicine2018

Current understanding of the human microbiome.

Jack A Gilbert, Martin J Blaser, J Gregory Caporaso, Janet K Jansson, Susan V Lynch, Rob Knight

Abstract readReview
In one paragraph

Review in Nature medicine, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1,315 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1,315citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1,315 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
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  4. Pooled it
  5. Trial
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  8. Review
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  13. Core-shell commensal biocapsules forBioactive materials · 2026
    Article
  14. Review
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  17. The microbiota-proteostasis axis: implications in neurodegenerative diseases.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2026
    Review
  18. Article
  19. Article
  20. Review

1,255 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jack A GilbertMicrobiome Center, Department of Surgery, University of Chicago, Chicago, Illinois, USA.
Martin J BlaserNew York University Langone Medical Center, New York, New York, USA.ORCID 0000-0003-2447-2443
J Gregory CaporasoPathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, USA.
Janet K JanssonEarth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington, USA.
Susan V LynchDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Rob KnightDepartment of Pediatrics, School of Medicine, University of California San Diego, La Jolla, California, USA.ORCID 0000-0002-0975-9019

Funding

Training/Career Development and Education Core and PlansU54CA143925 · NCI · NORTHERN ARIZONA UNIVERSITY · PI Jason A Wilder · 2009 to 2026
$27.5M
NCI NIH HHS U54 CA143925
6 · The paper itself

Abstract

Our understanding of the link between the human microbiome and disease, including obesity, inflammatory bowel disease, arthritis and autism, is rapidly expanding. Improvements in the throughput and accuracy of DNA sequencing of the genomes of microbial communities that are associated with human samples, complemented by analysis of transcriptomes, proteomes, metabolomes and immunomes and by mechanistic experiments in model systems, have vastly improved our ability to understand the structure and function of the microbiome in both diseased and healthy states. However, many challenges remain. In this review, we focus on studies in humans to describe these challenges and propose strategies that leverage existing knowledge to move rapidly from correlation to causation and ultimately to translation into therapies.

Indexed as

MicrobiotaBiomarkersDiseaseHumansLife StylePrecision MedicineTranslational Research, BiomedicalBiomarkers

Identifiers

PMID29634682
PMCPMC7043356

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.