Evidence map›Paper›PMID 29632642›Full record

ArticleOncotarget2018

PIK3CA and KRAS mutations in cell free circulating DNA are useful markers for monitoring ovarian clear cell carcinoma.

Asuka Morikawa, Tomoatsu Hayashi, Naomi Shimizu, Mana Kobayashi, Kenzui Taniue, Akiko Takahashi, Kota Tachibana, Misato Saito, Ayako Kawabata, Yasushi Iida and 9 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Circulating tumor DNA: a noninvasive biomarker for tracking ovarian cancer.Reproductive biology and endocrinology : RB&E · 2021
    Review
  10. Review
  11. Review
  12. Review
  13. Article
  14. Molecular profiling of clear cell adenocarcinoma of the urinary tract.Virchows Archiv : an international journal of pathology · 2019
    Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 3 institutions in 1 country.

Asuka MorikawaLaboratory of Molecular and Genetic Information, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
Tomoatsu HayashiLaboratory of Molecular and Genetic Information, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
Naomi ShimizuLaboratory of Molecular and Genetic Information, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
Mana KobayashiLaboratory of Molecular and Genetic Information, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
Kenzui TaniueLaboratory of Molecular and Genetic Information, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
Akiko TakahashiLaboratory of Molecular and Genetic Information, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
Kota TachibanaLaboratory of Molecular and Genetic Information, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
Misato SaitoDepartment of Obstetrics and Gynecology, Jikei University School of Medicine, Tokyo, Japan.
Ayako KawabataLaboratory of Molecular and Genetic Information, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
Yasushi IidaDepartment of Obstetrics and Gynecology, Jikei University School of Medicine, Tokyo, Japan.
Kazu UedaDepartment of Obstetrics and Gynecology, Jikei University School of Medicine, Tokyo, Japan.
Motoaki SaitoDepartment of Obstetrics and Gynecology, Jikei University School of Medicine, Tokyo, Japan.
Nozomu YanaiharaDepartment of Obstetrics and Gynecology, Jikei University School of Medicine, Tokyo, Japan.
Hiroshi TanabeDepartment of Obstetrics and Gynecology, Jikei University, Kashiwa Hospital, Chiba, Japan.
Kyosuke YamadaDepartment of Obstetrics and Gynecology, Jikei University School of Medicine, Tokyo, Japan.
Hirokuni TakanoDepartment of Obstetrics and Gynecology, Jikei University, Kashiwa Hospital, Chiba, Japan.
Osamu NurekiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan.
Aikou OkamotoDepartment of Obstetrics and Gynecology, Jikei University School of Medicine, Tokyo, Japan.
Tetsu AkiyamaLaboratory of Molecular and Genetic Information, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Tokyo, Japan.
The University of Tokyo · JPJikei University School of Medicine · JPJikei University Kashiwa hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ovarian clear cell carcinoma (OCCC) exhibits distinct phenotypes, such as resistance to chemotherapy, poor prognosis and an association with endometriosis. Biomarkers and imaging techniques currently in use are not sufficient for reliable diagnosis of this tumor or prediction of therapeutic response. It has recently been reported that analysis of somatic mutations in cell-free circulating DNA (cfDNA) released from tumor tissues can be useful for tumor diagnosis. In the present study, we attempted to detect mutations in PIK3CA and KRAS in cfDNA from OCCC patients using droplet digital PCR (ddPCR). Here we show that we were able to specifically detect PIK3CA-H1047R and KRAS-G12D in cfDNA from OCCC patients and monitor their response to therapy. Furthermore, we found that by cleaving wild-type PIK3CA using the CRISPR/Cas9 system, we were able to improve the sensitivity of the ddPCR method and detect cfDNA harboring PIK3CA-H1047R. Our results suggest that detection of mutations in cfDNA by ddPCR would be useful for the diagnosis of OCCC, and for predicting its recurrence.

Indexed as

cfDNAdigital PCRKRASOCCCPIK3CA

Identifiers

PMID29632642
PMCPMC5880602
OpenAlexW2794108221

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.