Evidence map›Paper›PMID 29632412›Full record

ArticleNature chemical biology2018

Profiling and genetic control of the murine immunoglobulin G glycome.

Jasminka Krištić, Olga O Zaytseva, Ramesh Ram, Quang Nguyen, Mislav Novokmet, Frano Vučković, Marija Vilaj, Irena Trbojević-Akmačić, Marija Pezer, Kathleen M Davern and 2 more

Abstract read
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In one paragraph

Article in Nature chemical biology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  11. A mutation inbioRxiv : the preprint server for biology · 2023
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  17. Genetic Mapping of Behavioral Traits Using the Collaborative Cross Resource.International journal of molecular sciences · 2022
    Article
  18. Article
  19. High-Throughput Glycomic Methods.Chemical reviews · 2022
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jasminka KrištićGlycoscience Research Laboratory, Genos Ltd., Zagreb, Croatia.ORCID http://orcid.org/0000-0001-8463-3814
Olga O ZaytsevaGlycoscience Research Laboratory, Genos Ltd., Zagreb, Croatia.
Ramesh RamCentre for Diabetes Research, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, WA, Australia.
Quang NguyenCentre for Diabetes Research, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, WA, Australia.
Mislav NovokmetGlycoscience Research Laboratory, Genos Ltd., Zagreb, Croatia.
Frano VučkovićGlycoscience Research Laboratory, Genos Ltd., Zagreb, Croatia.ORCID http://orcid.org/0000-0002-4845-0882
Marija VilajGlycoscience Research Laboratory, Genos Ltd., Zagreb, Croatia.
Irena Trbojević-AkmačićGlycoscience Research Laboratory, Genos Ltd., Zagreb, Croatia.ORCID http://orcid.org/0000-0003-0106-0155
Marija PezerGlycoscience Research Laboratory, Genos Ltd., Zagreb, Croatia.ORCID http://orcid.org/0000-0002-6480-1427
Kathleen M DavernCentre for Diabetes Research, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, WA, Australia.
Grant MorahanCentre for Diabetes Research, Harry Perkins Institute of Medical Research, QEII Medical Centre, Nedlands, WA, Australia.
Gordan LaucGlycoscience Research Laboratory, Genos Ltd., Zagreb, Croatia. glauc@pharma.hr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immunoglobulin G (IgG) glycosylation is essential for function of the immune system, but the genetic and environmental factors that underlie its inter-individual variability are not well defined. The Collaborative Cross (CC) genetic resource harnesses over 90% of the common genetic variation of the mouse. By analyzing the IgG glycome composition of 95 CC strains, we made several important observations: (i) glycome variation between mouse strains was higher than between individual humans, despite all mice having the same environmental influences; (ii) five genetic loci were found to be associated with murine IgG glycosylation; (iii) variants outside traditional glycosylation site motifs affected glycome variation; (iv) bisecting N-acetylglucosamine (GlcNAc) was produced by several strains although most previous studies have reported the absence of glycans containing the bisecting GlcNAc on murine IgGs; and (v) common laboratory mouse strains are not optimal animal models for studying effects of glycosylation on IgG function.

Indexed as

GlycosylationAcetylglucosamineAgingAnimalsFucoseGene Expression RegulationGenetic VariationGlycopeptidesGlycoproteinsHumansImmunoglobulin GMiceMice, Inbred C57BLMice, Inbred NODPeptidesPhenotypeAcetylglucosamineFucoseGlycopeptidesGlycoproteinsglycosylated IgGImmunoglobulin GPeptidesPolysaccharides

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.