Evidence map›Paper›PMID 29632072›Full record

ArticleThe Journal of biological chemistry2018

Cyanobacteriochrome-based photoswitchable adenylyl cyclases (cPACs) for broad spectrum light regulation of cAMP levels in cells.

Matthew Blain-Hartung, Nathan C Rockwell, Marcus V Moreno, Shelley S Martin, Fei Gan, Donald A Bryant, J Clark Lagarias

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Cyanobacteriochromes: A Rainbow of Photoreceptors.Annual review of microbiology · 2024
    Review
  3. Article
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  8. Novel cyanobacteriochrome photoreceptor with the second Cys residue showing atypical orange/blue reversible photoconversion.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2023
    Article
  9. Article
  10. Protein-chromophore interactions controlling photoisomerization in red/green cyanobacteriochromes.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2022
    Article
  11. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Matthew Blain-HartungFrom the Department of Molecular and Cellular Biology, University of California, Davis, California 95616.
Nathan C RockwellFrom the Department of Molecular and Cellular Biology, University of California, Davis, California 95616.
Marcus V MorenoFrom the Department of Molecular and Cellular Biology, University of California, Davis, California 95616.
Shelley S MartinFrom the Department of Molecular and Cellular Biology, University of California, Davis, California 95616.
Fei Ganthe Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, and.
Donald A Bryantthe Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802, and.ORCID 0000-0003-2782-5988
J Clark LagariasFrom the Department of Molecular and Cellular Biology, University of California, Davis, California 95616, jclagarias@ucdavis.edu.
University of California, Davis · USPennsylvania State University · US

Funding

UC Davis MCB T32 Administrative Supplement to Recognize Excellence in Diversity, Equity, Inclusion, and Accessibility (DEIA) MentorshipT32GM007377 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI CHEDIN, FREDERIC LOUIS · 1985 to 2023
$9.9M
NIGMS NIH HHS T32 GM007377
6 · The paper itself

Abstract

Class III adenylyl cyclases generate the ubiquitous second messenger cAMP from ATP often in response to environmental or cellular cues. During evolution, soluble adenylyl cyclase catalytic domains have been repeatedly juxtaposed with signal-input domains to place cAMP synthesis under the control of a wide variety of these environmental and endogenous signals. Adenylyl cyclases with light-sensing domains have proliferated in photosynthetic species depending on light as an energy source, yet are also widespread in nonphotosynthetic species. Among such naturally occurring light sensors, several flavin-based photoactivated adenylyl cyclases (PACs) have been adopted as optogenetic tools to manipulate cellular processes with blue light. In this report, we report the discovery of a cyanobacteriochrome-based photoswitchable adenylyl cyclase (cPAC) from the cyanobacterium

Indexed as

Gene Expression Regulation, EnzymologicLightAdenylyl CyclasesCatalytic DomainCyanobacteriaCyclic AMPFlavinsMutationPhotoreceptors, MicrobialSignal TransductionAdenylyl CyclasesCyclic AMPFlavinsPhotoreceptors, Microbialadenylate cyclase (adenylyl cyclase)biliproteinbiliverdincAMPcyanobacterialinear tetrapyrroleoptogeneticsphotoreceptorphotoswitchphototransductionsignal transduction

Identifiers

PMID29632072
PMCPMC5986202
OpenAlexW2796751041

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.