Evidence map›Paper›PMID 29630666›Full record

ArticlePLoS pathogens2018

Viral chimeras decrypt the role of enterovirus capsid proteins in viral tropism, acid sensitivity and optimal growth temperature.

Léna Royston, Manel Essaidi-Laziosi, Francisco J Pérez-Rodríguez, Isabelle Piuz, Johan Geiser, Karl-Heinz Krause, Song Huang, Samuel Constant, Laurent Kaiser, Dominique Garcin and 1 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  6. Microorganisms · 2021
    Review
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  8. Frontiers in cellular and infection microbiology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Léna RoystonUniversity of Geneva Faculty of Medicine, Department of Microbiology and Molecular Medicine, 1 Rue Michel-Servet, Geneva, Switzerland.
Manel Essaidi-LaziosiUniversity of Geneva Faculty of Medicine, Department of Microbiology and Molecular Medicine, 1 Rue Michel-Servet, Geneva, Switzerland.
Francisco J Pérez-RodríguezUniversity of Geneva Faculty of Medicine, Department of Microbiology and Molecular Medicine, 1 Rue Michel-Servet, Geneva, Switzerland.ORCID 0000-0003-0380-9625
Isabelle PiuzUniversity of Geneva Faculty of Medicine, Department of Microbiology and Molecular Medicine, 1 Rue Michel-Servet, Geneva, Switzerland.
Johan GeiserUniversity of Geneva Faculty of Medicine, Department of Microbiology and Molecular Medicine, 1 Rue Michel-Servet, Geneva, Switzerland.
Karl-Heinz KrauseUniversity of Geneva Faculty of Medicine, Department of Pathology and Immunology, 1 Rue Michel-Servet, Geneva, Switzerland.ORCID 0000-0002-9033-6768
Song HuangEpithelix Sàrl, 18 Chemin des Aulx, Geneva, Switzerland.
Samuel ConstantEpithelix Sàrl, 18 Chemin des Aulx, Geneva, Switzerland.ORCID 0000-0002-0931-2663
Laurent KaiserLaboratory of Virology, Division of Infectious Diseases, University of Geneva Hospitals, 4 Rue Gabrielle Perret-Gentil, Geneva 14, Switzerland.
Dominique GarcinUniversity of Geneva Faculty of Medicine, Department of Microbiology and Molecular Medicine, 1 Rue Michel-Servet, Geneva, Switzerland.
Caroline TapparelUniversity of Geneva Faculty of Medicine, Department of Microbiology and Molecular Medicine, 1 Rue Michel-Servet, Geneva, Switzerland.ORCID 0000-0002-0411-6567
University of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite their genetic similarities, enteric and respiratory enteroviruses (EVs) have highly heterogeneous biophysical properties and cause a vast diversity of human pathologies. In vitro differences include acid sensitivity, optimal growth temperature and tissue tropism, which reflect a preferential in vivo replication in the respiratory or gastrointestinal tract and are thus key determinants of EV virulence. To investigate the underlying cause of these differences, we generated chimeras at the capsid-level between EV-D68 (a respiratory EV) and EV-D94 (an enteric EV). Although some chimeras were nonfunctional, EV-D94 with both the capsid and 2A protease or the capsid only of EV-D68 were both viable. Using this latter construct, we performed several functional assays, which indicated that capsid proteins determine acid sensitivity and tropism in cell lines and in respiratory, intestinal and neural tissues. Additionally, capsid genes were shown to also participate in determining the optimal growth temperature, since EV-D94 temperature adaptation relied on single mutations in VP1, while constructs with EV-D68 capsid could not adapt to higher temperatures. Finally, we demonstrate that EV-D68 maintains residual binding-capacity after acid-treatment despite a loss of infectivity. In contrast, non-structural rather than capsid proteins modulate the innate immune response in tissues. These unique biophysical insights expose another layer in the phenotypic diversity of one of world's most prevalent pathogens and could aid target selection for vaccine or antiviral development.

Indexed as

AcidsCapsid ProteinsEnterovirusEnterovirus InfectionsHumansIntestinesNeuronsRespiratory SystemTemperatureViral TropismAcidsCapsid Proteins

Identifiers

PMID29630666
PMCPMC5908207
OpenAlexW2798020033

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.