Evidence map›Paper›PMID 29629872›Full record

ArticleeLife2018

Radical and lunatic fringes modulate notch ligands to support mammalian intestinal homeostasis.

Preetish Kadur Lakshminarasimha Murthy, Tara Srinivasan, Matthew S Bochter, Rui Xi, Anastasia Kristine Varanko, Kuei-Ling Tung, Fatih Semerci, Keli Xu, Mirjana Maletic-Savatic, Susan E Cole and 1 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
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  11. Review
  12. Genetics of irritable bowel syndrome: shifting gear via biobank-scale studies.Nature reviews. Gastroenterology & hepatology · 2022
    Review
  13. Article
  14. Article
  15. Glycans that regulate Notch signaling in the intestine.Biochemical Society transactions · 2022
    Review
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Preetish Kadur Lakshminarasimha Murthy *Center for Genomics and Computational Biology, Department of Biomedical Engineering, Duke University, Durham, United States.ORCID 0000-0002-9762-8376
Tara Srinivasan *Mienig School of Biomedical Engineering, Cornell University, Ithaca, United States.
Matthew S BochterDepartment of Molecular Genetics, Ohio State University, Columbus, United States.ORCID 0000-0001-9607-3770
Rui XiCenter for Genomics and Computational Biology, Department of Biomedical Engineering, Duke University, Durham, United States.
Anastasia Kristine VarankoMienig School of Biomedical Engineering, Cornell University, Ithaca, United States.
Kuei-Ling TungCenter for Genomics and Computational Biology, Department of Biomedical Engineering, Duke University, Durham, United States.
Fatih SemerciDepartment of Pediatrics, Baylor College of Medicine, Houston, United States.ORCID 0000-0002-0512-1827
Keli XuDepartment of Neurobiology and Anatomical Sciences, University of Mississippi Medical Center, Jackson, United States.
Mirjana Maletic-SavaticDepartment of Pediatrics, Baylor College of Medicine, Houston, United States.ORCID 0000-0002-6548-4662
Susan E ColeDepartment of Molecular Genetics, Ohio State University, Columbus, United States.
Xiling ShenCenter for Genomics and Computational Biology, Department of Biomedical Engineering, Duke University, Durham, United States.ORCID 0000-0002-4978-3531
Duke University · USBaylor College of Medicine · USCornell University · USThe Ohio State University · USUniversity of Mississippi Medical Center · US

Funding

Robust Control of the Stem Cell NicheR35GM122465 · NIGMS · TERASAKI INSTITUTE FOR BIOMEDICAL INNOVATION · PI Xiling Shen · 2017 to 2026
$5.6M
Imaging Mass Spectrometry for metabolome mappingR01GM120033 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI LIU, ZHANDONG, MALETIC-SAVATIC, MIRJANA · 2017 to 2021
$2.5M
Robustness of the Intestinal Stem Cell NicheR01GM114254 · NIGMS · DUKE UNIVERSITY · PI SHEN, XILING · 2015 to 2017
$918k
NIEHS NIH HHS 27302C0138NIGMS NIH HHS R01 GM114254NIGMS NIH HHS R01 GM120033NIGMS NIH HHS R35 GM122465NIH HHS R35GM122465, R01GM114254
6 · The paper itself

Abstract

Notch signalling maintains stem cell regeneration at the mouse intestinal crypt base and balances the absorptive and secretory lineages in the upper crypt and villus. Here we report the role of Fringe family of glycosyltransferases in modulating Notch activity in the two compartments. At the crypt base, RFNG is enriched in the Paneth cells and increases cell surface expression of DLL1 and DLL4. This promotes Notch activity in the neighbouring

Indexed as

HomeostasisAdaptor Proteins, Signal TransducingAnimalsCalcium-Binding ProteinsCell DifferentiationCell ProliferationCells, CulturedGlucosyltransferasesGlycosyltransferasesIntercellular Signaling Peptides and ProteinsIntestinesIntracellular Signaling Peptides and ProteinsMembrane ProteinsMiceMice, Inbred C57BLMice, KnockoutAdaptor Proteins, Signal TransducingCalcium-Binding ProteinsDlk1 protein, mouseDLL4 protein, mouseGlucosyltransferasesGlycosyltransferasesIntercellular Signaling Peptides and ProteinsIntracellular Signaling Peptides and ProteinsLgr5 protein, mouseMembrane ProteinsMfng protein, mouseProteinsReceptors, G-Protein-CoupledReceptors, NotchRfng protein, mousecell biologydevelopmental biologyFringeGlycosylationIntestinal CryptsLgr5+ Stem CellmouseNotch Signallingstem cells

Identifiers

PMID29629872
PMCPMC5896954
OpenAlexW2797249769

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.