Evidence map›Paper›PMID 29627866›Full record

ArticleProtoplasma2018

Replication timing of large Sorex granarius (Soricidae, Eulipotyphla) telomeres.

Julia M Minina, Tatjana V Karamysheva, Nicolaj B Rubtsov, Natalia S Zhdanova

Abstract read
PubMed Publisher
In one paragraph

Article in Protoplasma, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Julia M MininaThe Federal Research Center Institute of Cytology and Genetics of SB RAS, Lavrentjeva av. 10, 630090, Novosibirsk, Russia. minina_jul@bionet.nsc.ru.ORCID http://orcid.org/0000-0003-1504-9803
Tatjana V KaramyshevaThe Federal Research Center Institute of Cytology and Genetics of SB RAS, Lavrentjeva av. 10, 630090, Novosibirsk, Russia.
Nicolaj B RubtsovThe Federal Research Center Institute of Cytology and Genetics of SB RAS, Lavrentjeva av. 10, 630090, Novosibirsk, Russia.
Natalia S ZhdanovaThe Federal Research Center Institute of Cytology and Genetics of SB RAS, Lavrentjeva av. 10, 630090, Novosibirsk, Russia.
Institute of Cytology and Genetics · RU

Funding

Federal Research Center Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences No 0324-2018-0019
6 · The paper itself

Abstract

Previously, we described the unique feature of telomeric regions in Iberian shrew Sorex granarius: its telomeres have two ranges of size, very small (3.8 kb of telomeric repeats on average) and very large discontinuous telomeres (213 kb) interrupted with 18S rDNA. In this study, we have demonstrated extraordinary replication pattern of S. granarius large telomeres that have not been shown before in other studied mammal. Using the ReD-FISH procedure, we observed prolonged, through S period, large telomere replication. Furthermore, revealed ReD-FISH asymmetric signals were probably caused by partial replication of telomeres within an hour of 5-bromodeoxyuridine treatment due to the large size and special organization. We also found that in contrast to the telomeric halo from primary fibroblasts of bovine, mink, and common shrew, telomere halo of S. granarius consists of multiple loops bundled together, some of which contain rDNA. Here, we suggested several replicons firing possibly stochastic in each large telomere. Finally, we performed the TIF assay to reveal DNA damage responses at the telomeres, and along with TIF in nuclei, we found large bodies of telomeric DNA and ɤ-H2AX in the cytoplasm and on the surface of fibroblasts. We discuss the possibility of additional origin activation together with recombination-dependent replication pathways, mainly homologous recombination including BIR for replication fork stagnation overcoming and further S. granarius large telomere replication.

Indexed as

AnimalsDNA DamageDNA ReplicationRNA, Ribosomal, 18SShrewsTelomereRNA, Ribosomal, 18SHaloReD-FISHSorex granariusTelomere replication

Identifiers

PMID29627866
OpenAlexW2795393321

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.