Evidence map›Paper›PMID 29626157›Full record

ArticleThe Biochemical journal2018

A plasmid borne, functionally novel glycoside hydrolase family 30 subfamily 8 endoxylanase from solventogenic

Franz J St John, Diane Dietrich, Casey Crooks, Peter Balogun, Vesna de Serrano, Edwin Pozharski, James Kennon Smith, Elizabeth Bales, Jason Hurlbert

Open access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Enzymatic Production of Prebiotic Xylooligosaccharides Using aJournal of agricultural and food chemistry · 2026
    Article
  2. Recent progress in the microbial production of Xylanase.World journal of microbiology & biotechnology · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Non-Specific GH30_7 Endo-β-1,4-xylanase fromMolecules (Basel, Switzerland) · 2021
    Article
  7. Catalytic Diversity of GH30 Xylanases.Molecules (Basel, Switzerland) · 2021
    Article
  8. Article
  9. Article
  10. Crystal structure of GH30-7 endoxylanase C from the filamentous fungus Talaromyces cellulolyticus.Acta crystallographica. Section F, Structural biology communications · 2020
    Article
  11. Article
  12. GH30-7 Endoxylanase C from the Filamentous FungusApplied and environmental microbiology · 2019
    Article
  13. Article
  14. Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Franz J St JohnInstitute for Microbial and Biochemical Technology, Forest Products Laboratory, USDA Forest Service, Madison, WI, U.S.A. fjstjohn@gmail.com.ORCID 0000-0003-3458-5628
Diane DietrichInstitute for Microbial and Biochemical Technology, Forest Products Laboratory, USDA Forest Service, Madison, WI, U.S.A.
Casey CrooksInstitute for Microbial and Biochemical Technology, Forest Products Laboratory, USDA Forest Service, Madison, WI, U.S.A.
Peter BalogunInstitute for Microbial and Biochemical Technology, Forest Products Laboratory, USDA Forest Service, Madison, WI, U.S.A.
Vesna de SerranoDepartment of Pharmaceutical Sciences, University of Maryland School of Pharmacy, Baltimore, MD, U.S.A.
Edwin PozharskiInstitute for Bioscience and Biotechnology Research, Department of Biochemistry and Molecular Biology, University of Maryland School of Medicine, Rockville, MD, U.S.A.
James Kennon SmithDepartment of Chemistry, Physics and Geology, Winthrop University, Rock Hill, SC, U.S.A.
Elizabeth BalesDepartment of Chemistry, Physics and Geology, Winthrop University, Rock Hill, SC, U.S.A.
Jason HurlbertDepartment of Chemistry, Physics and Geology, Winthrop University, Rock Hill, SC, U.S.A.
Forest Products Laboratory · USWinthrop University · USUniversity of Maryland, Baltimore · US

Funding

Supplement for South Carolina BRIN - 1P20 RR16461P20RR016461 · NCRR · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI DEAVOR, JAMES · 2001 to 2011
$32.3M
NCRR NIH HHS P20 RR016461
6 · The paper itself

Abstract

Glycoside hydrolase family 30 subfamily 8 (GH30-8) β-1,4-endoxylanases are known for their appendage-dependent function requiring recognition of an α-1,2-linked glucuronic acid (GlcA) common to glucuronoxylans for hydrolysis. Structural studies have indicated that the GlcA moiety of glucuronoxylans is coordinated through six hydrogen bonds and a salt bridge. These GlcA-dependent endoxylanases do not have significant activity on xylans that do not bear GlcA substitutions such as unsubstituted linear xylooligosaccharides or cereal bran arabinoxylans. In the present study, we present the structural and biochemical characteristics of xylanase 30A from

Indexed as

Models, MolecularProtein ConformationAmino Acid SequenceCatalytic DomainClostridiumCrystallography, X-RayEndo-1,4-beta XylanasesGlucuronatesHydrolysisOligosaccharidesPlasmidsSequence HomologySubstrate SpecificityEndo-1,4-beta XylanasesGlucuronatesOligosaccharidesxylooligosaccharidearabinoxylanGH30glycoside hydrolase family 30protein structurestructure–function

Identifiers

PMID29626157
PMCPMC5934979
OpenAlexW2795531422

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.