Evidence map›Paper›PMID 29625620›Full record

ArticleVirology journal2018

Identification and genetic analysis of Kadipiro virus isolated in Shandong province, China.

Weijia Zhang, Fan Li, Aiguo Liu, Xiaojuan Lin, Shihong Fu, Jingdong Song, Guifang Liu, Nan Shao, Zexin Tao, Qianying Wang and 6 more

Abstract read
In one paragraph

Article in Virology journal, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. A Systematic Review on the Viruses ofTropical medicine and infectious disease · 2023
    Review
  5. Persistence of Tembusu Virus inPathogens (Basel, Switzerland) · 2023
    Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Weijia ZhangSchool of Public Health, Shandong University, Jinan, 250012, People's Republic of China.
Fan LiState Key Laboratory of Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Aiguo LiuInstitute for Immunization Program, Center for Disease Control and Prevention of Dongying City, Dongying, 257091, People's Republic of China.
Xiaojuan LinInstitute for Immunization Program, Shandong Center for Disease Control and Prevention, Jinan, 250014, People's Republic of China.
Shihong FuState Key Laboratory of Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Jingdong SongState Key Laboratory of Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Guifang LiuInstitute for Immunization Program, Shandong Center for Disease Control and Prevention, Jinan, 250014, People's Republic of China.
Nan ShaoState Key Laboratory of Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Zexin TaoInstitute for Immunization Program, Shandong Center for Disease Control and Prevention, Jinan, 250014, People's Republic of China.
Qianying WangState Key Laboratory of Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Ying HeState Key Laboratory of Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Wenwen LeiState Key Laboratory of Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Guodong LiangState Key Laboratory of Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China.
Aiqiang XuInstitute for Immunization Program, Shandong Center for Disease Control and Prevention, Jinan, 250014, People's Republic of China.
Li ZhaoSchool of Public Health, Shandong University, Jinan, 250012, People's Republic of China. dlzhl@sdu.edu.cn.
Huanyu WangState Key Laboratory of Infectious Disease Prevention and Control, Chinese Center for Disease Control and Prevention, Beijing, People's Republic of China. wanghy@ivdc.chinacdc.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundKadipiro virus (KDV) belongs to the Reoviridae family, which consists of segmented, non-enveloped, double-stranded RNA viruses. It has previously been isolated from Culex, Anopheles, Armigeres and Aedes mosquitoes in Indonesia and China. Here, we describe the isolation and characterization of SDKL1625 from Anopheles sinensis mosquitoes in Shandong province, China.

methodsIn this study, we isolated Kadipiro virus in Aedes albopictus C6/36 cell culture and the complete genome sequencing was made by next generation sequencing.

resultsWe isolated and characterized a Kadipiro virus from Anopheles sinensis mosquitoes in 2016 in Shandong province, China. Nucleotide and amino acid homology analysis of SDKL1625 showed higher levels of sequence identity with QTM27331 (Odonata, China, 2016) than with JKT-7075 (Culex fuscocephalus, Indonesia, 1981). The SDKL1625 has 86-97% amino acid identity with the JKT-7075, 88-99% amino acid identity with the QTM27331. Among the 12 fragments, VP1, VP2, VP4, VP6, VP7, VP9 and VP12 showed high amino acid identity (> 90%) and VP5 showed the lowest identity (86% and 88%).

conclusionsThis is the first identification of KDV from mosquito in China. Virus morphology and genome organization were also determined, which will further enrich our understanding of the molecular biological characteristics of KDV and seadornaviruses.

Indexed as

AnimalsAnophelesCell LineChinaColtivirusGenome, ViralGenomicsHigh-Throughput Nucleotide SequencingInsect VectorsPhylogenyRNA, ViralRNA, ViralGenetic analysisIdentificationKadipiro virusSeadornavirus

Identifiers

PMID29625620
PMCPMC5889548

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.