Evidence map›Paper›PMID 29623005›Full record

ArticleJournal of biomolecular techniques : JBT2018

Challenges and Opportunities for Biological Mass Spectrometry Core Facilities in the Developing World.

Liam Bell, Bridget Calder, Reinhard Hiller, Ashwil Klein, Nelson C Soares, Stoyan H Stoychev, Barend C Vorster, David L Tabb

Open access · diamondAbstract read
In one paragraph

Article in Journal of biomolecular techniques : JBT, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Clinical Chemistry for Developing Countries: Mass Spectrometry.Annual review of analytical chemistry (Palo Alto, Calif.) · 2021
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 1 country.

Liam BellCentre for Proteomic and Genomic Research, Observatory, Cape Town 7925, South Africa.
Bridget CalderUniversity of Cape Town, Observatory, Cape Town 7925, South Africa.
Reinhard HillerCentre for Proteomic and Genomic Research, Observatory, Cape Town 7925, South Africa.
Ashwil KleinUniversity of the Western Cape, Bellville, Cape Town 7925, South Africa.
Nelson C SoaresUniversity of Cape Town, Observatory, Cape Town 7925, South Africa.
Stoyan H StoychevCouncil for Scientific and Industrial Research, Pretoria 0001, South Africa.
Barend C VorsterCentre for Human Metabolomics, North-West University, Potchefstroom 2520, South Africa; and.
David L TabbDepartment of Science and Technology/National Research Foundation Centre of Excellence for Biomedical Tuberculosis Research, South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Cape Town 7505, South Africa.
African Organisation for Research and Training in Cancer · ZAUniversity of Cape Town · ZACouncil for Scientific and Industrial Research · ZANational Research Foundation · ZANorth-West University · ZAUniversity of the Western Cape · ZA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The developing world is seeing rapid growth in the availability of biological mass spectrometry (MS), particularly through core facilities. As proteomics and metabolomics becomes locally feasible for investigators in these nations, application areas associated with high burden in these nations, such as infectious disease, will see greatly increased research output. This article evaluates the rapid growth of MS in South Africa (currently approaching 20 laboratories) as a model for establishing MS core facilities in other nations of the developing world. Facilities should emphasize new services rather than new instruments. The reduction of the delays associated with reagent and other supply acquisition would benefit both facilities and the users who make use of their services. Instrument maintenance and repair, often mediated by an in-country business for an international vendor, is also likely to operate on a slower schedule than in the wealthiest nations. A key challenge to facilities in the developing world is educating potential facility users in how best to design experiments for proteomics and metabolomics, what reagents are most likely to introduce problematic artifacts, and how to interpret results from the facility. Here, we summarize the experience of 6 different institutions to raise the level of biological MS available to researchers in South Africa.

Indexed as

Developing CountriesCosts and Cost AnalysisMass SpectrometrySouth Africacapacity developmentpublication standardsshared instrumentsSouth Africa

Identifiers

PMID29623005
PMCPMC5865507
OpenAlexW2795675972

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.