Evidence map›Paper›PMID 29621343›Full record

ArticlePloS one2018

Differential accumulation of proteins in oil palms affected by fatal yellowing disease.

Sidney Vasconcelos do Nascimento, Marcelo Murad Magalhães, Roberto Lisboa Cunha, Paulo Henrique de Oliveira Costa, Ronnie Cley de Oliveira Alves, Guilherme Corrêa de Oliveira, Rafael Borges da Silva Valadares

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Article
  3. Molecular Mechanisms UnderlyingInternational journal of environmental research and public health · 2022
    Article
  4. Article
  5. Review
  6. Article
  7. Culture ofPathogens (Basel, Switzerland) · 2021
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Sidney Vasconcelos do NascimentoInstituto Tecnológico Vale, Belém, Pará, Brazil.
Marcelo Murad MagalhãesAnalysis of sustainable system laboratory, Embrapa Amazônia Oriental, Belém, Pará, Brazil.
Roberto Lisboa CunhaPrograma de Pós-Graduação em Biotecnologia Aplicada à Agropecuária, Universidade Federal Rural da Amazônia, Belém, Pará, Brazil.
Paulo Henrique de Oliveira CostaInstituto Tecnológico Vale, Belém, Pará, Brazil.
Ronnie Cley de Oliveira AlvesInstituto Tecnológico Vale, Belém, Pará, Brazil.
Guilherme Corrêa de OliveiraInstituto Tecnológico Vale, Belém, Pará, Brazil.
Rafael Borges da Silva ValadaresInstituto Tecnológico Vale, Belém, Pará, Brazil.ORCID 0000-0003-4481-982X
Vale Technological Institute · BRBrazilian Agricultural Research Corporation · BRUniversidade Federal Rural da Amazônia · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is still no consensus on the true origin of fatal yellowing, one of the most important diseases affecting oil palm (Elaeis guineensis Jacq.) plantations. This study involved two-dimensional liquid chromatography coupled with tandem mass spectrometry (2D-UPLC-MSE) analyses to identify changes in protein profiles of oil palms affected by FY disease. Oil palm roots were sampled from two growing areas. Differential accumulation of proteins was assessed by comparing plants with and without symptoms and between plants at different stages of FY development. Most of the proteins identified with differential accumulation were those related to stress response and energy metabolism. The latter proteins include the enzymes alcohol dehydrogenase and aldehyde dehydrogenase, related to alcohol fermentation, which were identified in plants with and without symptoms. The presence of these enzymes suggests an anaerobic condition before or during FY. Transketolase, isoflavone reductase, cinnamyl alcohol dehydrogenase, caffeic acid 3-O-methyltransferase, S-adenosylmethionine synthase, aldehyde dehydrogenase and ferritin, among others, were identified as potential marker proteins and could be used to guide selection of FY-tolerant oil palm genotypes or to understand the source of this anomaly. When comparing different stages of FY, we observed high accumulation of alcohol dehydrogenase and other abiotic stress related-proteins at all disease stages. On the other hand, biological stress-related proteins were more accumulated at later stages of the disease. These results suggest that changes in abiotic factors can trigger FY development, creating conditions for the establishment of opportunistic pathogens.

Indexed as

Plant DiseasesArecaceaeChromatography, LiquidEnergy MetabolismPlant ProteinsPlant RootsStress, PhysiologicalTandem Mass SpectrometryPlant Proteins

Identifiers

PMID29621343
PMCPMC5886584
OpenAlexW2796207222

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.