Evidence map›Paper›PMID 29619604›Full record

ArticleMedical microbiology and immunology2018

Prevalence and genetic diversity of norovirus genogroup II in children less than 5 years of age with acute gastroenteritis in Tehran, Iran.

Mahsa Farsi, Fatemeh Roodbari, Behrooz Nejati, Arash Arashkia, Somayeh Jalilvand, Alireza Nateghian, Aliakbar Rahbarimanesh, Sayed Mahdi Marashi, Zabihollah Shoja

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Article in Medical microbiology and immunology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Mahsa FarsiBiology Department, Faculty of Basic Sciences, University of Mazandaran, Babolsar, Iran.
Fatemeh RoodbariBiology Department, Faculty of Basic Sciences, University of Mazandaran, Babolsar, Iran.
Behrooz NejatiBiology Department, Faculty of Basic Sciences, University of Mazandaran, Babolsar, Iran.
Arash ArashkiaVirology Department, Pasteur Institute of Iran, Tehran, Iran.
Somayeh JalilvandVirology Department, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran.
Alireza NateghianAli-Asghar Children's Hospital, Iran University of Medical Sciences, Tehran, Iran.
Aliakbar RahbarimaneshDepartment of Pediatric Infectious Diseases, Bahrami Children Hospital, Tehran University of Medical Sciences, Tehran, Iran.
Sayed Mahdi MarashiVirology Department, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran.
Zabihollah ShojaVirology Department, Pasteur Institute of Iran, Tehran, Iran. z_shoja@pasteur.ac.ir.ORCID http://orcid.org/0000-0001-5617-5844
Tehran University of Medical Sciences · IRUniversity of Mazandaran · IRPasteur Institute of Iran · IRIran University of Medical Sciences · IR

Funding

Pasteur Institute of Iran 783Tehran University of Medical Sciences (TUMS) 29165
6 · The paper itself

Abstract

Viral gastroenteritis is a major public health problem worldwide. In Iran, very limited studies have been performed with regard to the epidemiology of noroviruses. This study aimed to evaluate the prevalence and molecular epidemiology of GII noroviruses in hospitalized children less than 5 years of age with acute gastroenteritis (AGE). A total of 210 stool specimens were collected from Ali Asghar Children's Hospital and Bahrami Children's Hospital in Tehran, from June 2015 to June 2016. The samples were screened by real-time RT-PCR for genogroup II (GII). Positive samples were genotyped by semi-nested PCR followed by Sanger sequencing and phylogenetic analysis. Norovirus was identified in 36 (17.1%) of 210 specimens. Based on genetic analysis of RdRp and capsid sequences, the strains were clustered into eight RdRp-capsid genotypes: GII.P4-GII.4 Sydney_2012 (41.7%), GII.Pe-GII.4 Sydney_2012 (30.6%), GII.P21-GII.3 (13.9%), GII.P16-GII.4 Sydney_2012 (2.8%), GII.P16-GII.12 (2.8%), GII.P2-GII.4 Sydney_2012 (2.8%), GII.P7-GII.7 (2.8%) and GII.P2-GII.2 (2.8%). We determined several different co-circulating norovirus genotypes in children < 5 years of age with AGE in our hospital in Tehran, Iran. Continued molecular surveillance of noroviruses, including typing of both RdRp and capsid genes, is important for monitoring emerging strains in our continued efforts to reduce the overall burden of norovirus disease.

Indexed as

GenotypeCaliciviridae InfectionsChild, PreschoolFecesFemaleGastroenteritisGenetic VariationHumansInfantInfant, NewbornIranMaleMolecular EpidemiologyNorovirusPrevalenceReal-Time Polymerase Chain ReactionRNA, ViralCapsidGastroenteritisGenotypingNorovirusRdRp

Identifiers

PMID29619604
OpenAlexW2796097058

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.