Evidence map›Paper›PMID 29619227›Full record

ArticleHorticulture research2018

Transcriptome profiling reveals regulatory mechanisms underlying corolla senescence in petunia.

Hong Wang, XiaoXiao Chang, Jing Lin, Youhong Chang, Jen-Chih Chen, Michael S Reid, Cai-Zhong Jiang

Open access · goldAbstract read
In one paragraph

Article in Horticulture research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. A petunia transcription factor,Horticulture research · 2023
    Article
  5. Article
  6. Review
  7. Characterization and expression analysis ofPhysiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Article
  8. Know when and how to die: gaining insights into the molecular regulation of leaf senescence.Physiology and molecular biology of plants : an international journal of functional plant biology · 2022
    Review
  9. Article
  10. CRISPR/Cas9-Mediated Editing ofFrontiers in plant science · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Proteome and Ubiquitome Changes during Rose Petal Senescence.International journal of molecular sciences · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Hong Wang1Institute of Pomology/Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, China.
XiaoXiao Chang3Institute of Fruit Tree Research, Guangdong Academy of Agricultural Science, 510640 Guangzhou, China.
Jing Lin1Institute of Pomology/Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, China.
Youhong Chang1Institute of Pomology/Jiangsu Key Laboratory for Horticultural Crop Genetic Improvement, Jiangsu Academy of Agricultural Sciences, 210014 Nanjing, China.
Jen-Chih Chen2Department of Plant Sciences, University of California, Davis, Davis, CA 95616 USA.
Michael S Reid2Department of Plant Sciences, University of California, Davis, Davis, CA 95616 USA.
Cai-Zhong Jiang2Department of Plant Sciences, University of California, Davis, Davis, CA 95616 USA.ORCID 0000-0002-5972-7963
Jiangsu Academy of Agricultural Sciences · CNAgricultural Research Service · USGuangdong Academy of Agricultural Sciences · CNNational Taiwan University · TWUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic regulatory mechanisms that govern natural corolla senescence in petunia are not well understood. To identify key genes and pathways that regulate the process, we performed a transcriptome analysis in petunia corolla at four developmental stages, including corolla fully opening without anther dehiscence (D0), corolla expansion, 2 days after anthesis (D2), corolla with initial signs of senescence (D4), and wilting corolla (D7). We identified large numbers of differentially expressed genes (DEGs), ranging from 4626 between the transition from D0 and D2, 1116 between D2 and D4, a transition to the onset of flower senescence, and 327 between D4 and D7, a developmental stage representing flower senescence. KEGG analysis showed that the auxin- and ethylene-related hormone biosynthesis and signaling transduction pathways were significantly activated during the flower development and highly upregulated at onset of flower senescence. Ethylene emission was detected at the D2 to D4 transition, followed by a large eruption at the D4 to D7 transition. Furthermore, large numbers of transcription factors (TFs) were activated over the course of senescence. Functional analysis by virus-induced gene silencing (VIGS) experiments demonstrated that inhibition of the expression of TFs, such as ethylene-related ERF, auxin-related ARF, bHLH, HB, and MADS-box, significantly extended or shortened flower longevity. Our data suggest that hormonal interaction between auxin and ethylene may play critical regulatory roles in the onset of natural corolla senescence in petunia.

Identifiers

PMID29619227
PMCPMC5878830
OpenAlexW2805250274

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.