Evidence map›Paper›PMID 29618512›Full record

ArticleThe Journal of biological chemistry2018

Cyclase-associated protein 1 (CAP1) is a prenyl-binding partner of Rap1 GTPase.

Xuefeng Zhang, Shufen Cao, Guillermo Barila, Martin M Edreira, Kyoungja Hong, Mamta Wankhede, Nyla Naim, Matthias Buck, Daniel L Altschuler

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Article
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  4. Article
  5. Soluble cyclase-mediated nuclear cAMP synthesis is sufficient for cell proliferation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. CAP1 binds and activates adenylyl cyclase in mammalian cells.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  7. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Xuefeng ZhangFrom the Department of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261 and.
Shufen CaoDepartment of Physiology and Biophysics, School of Medicine, Case Western Reserve University, Cleveland, Ohio 44116.
Guillermo BarilaFrom the Department of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261 and.
Martin M EdreiraFrom the Department of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261 and.
Kyoungja HongFrom the Department of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261 and.
Mamta WankhedeFrom the Department of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261 and.
Nyla NaimFrom the Department of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261 and.
Matthias BuckDepartment of Physiology and Biophysics, School of Medicine, Case Western Reserve University, Cleveland, Ohio 44116.
Daniel L AltschulerFrom the Department of Pharmacology and Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15261 and altschul@pitt.edu.
University of Pittsburgh · USCase Western Reserve University · US

Funding

PREDOCTORAL TRAINING IN PHARMACOLOGICAL SCIENCEST32GM008424 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PAGANO, PATRICK J · 1994 to 2019
$3.4M
Structure and function of plexin - co-receptor interactionsR01EY029169 · NEI · CASE WESTERN RESERVE UNIVERSITY · PI BUCK, MATTHIAS · 2018 to 2021
$2.1M
Role of soluble adenylyl cyclase in TSH biologyR01GM130612 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ALTSCHULER, DANIEL L · 2019 to 2022
$1.7M
cAMP effector pathways in TSH signalingR01GM099775 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ALTSCHULER, DANIEL L · 2013 to 2016
$1.6M
purchase of HPLC instrumentR01GM112491 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI BUCK, MATTHIAS · 2014 to 2017
$1.3M
NEI NIH HHS R01 EY029169NIGMS NIH HHS R01 GM099775NIGMS NIH HHS R01 GM112491NIGMS NIH HHS R01 GM130612NIGMS NIH HHS T32 GM008424
6 · The paper itself

Abstract

Rap1 proteins are members of the Ras subfamily of small GTPases involved in many biological responses, including adhesion, cell proliferation, and differentiation. Like all small GTPases, they work as molecular allosteric units that are active in signaling only when associated with the proper membrane compartment. Prenylation, occurring in the cytosol, is an enzymatic posttranslational event that anchors small GTPases at the membrane, and prenyl-binding proteins are needed to mask the cytoplasm-exposed lipid during transit to the target membrane. However, several of these proteins still await discovery. In this study, we report that cyclase-associated protein 1 (CAP1) binds Rap1. We found that this binding is GTP-independent, does not involve Rap1's effector domain, and is fully contained in its C-terminal hypervariable region (HVR). Furthermore, Rap1 prenylation was required for high-affinity interactions with CAP1 in a geranylgeranyl-specific manner. The prenyl binding specifically involved CAP1's C-terminal hydrophobic β-sheet domain. We present a combination of experimental and computational approaches, yielding a model whereby the high-affinity binding between Rap1 and CAP1 involves electrostatic and nonpolar side-chain interactions between Rap1's HVR residues, lipid, and CAP1 β-sheet domain. The binding was stabilized by the lipid insertion into the β-solenoid whose interior was occupied by nonpolar side chains. This model was reminiscent of the recently solved structure of the PDEδ-K-Ras complex; accordingly, disruptors of this complex,

Indexed as

Protein PrenylationAnimalsCell Cycle ProteinsCells, CulturedCytoskeletal ProteinsDiterpenesHumansModels, MolecularMolecular Dynamics SimulationProtein Conformationrap GTP-Binding ProteinsRatsThyroid Epithelial CellsCAP1 protein, humanCell Cycle ProteinsCytoskeletal ProteinsDiterpenesgeranylgeranic acidRAP1B protein, humanrap GTP-Binding ProteinsCAP1cell signalingchaperonecyclase-associated protein 1lipid-binding proteinmolecular modelingprenyl-binding proteinprotein isoprenylationRas proteinsRas-related protein 1 (Rap1)small GTPase

Identifiers

PMID29618512
PMCPMC5961064
OpenAlexW2796245544

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.