Evidence map›Paper›PMID 29618122›Full record

ArticleNucleic acids research2018

DDX49 is an RNA helicase that affects translation by regulating mRNA export and the levels of pre-ribosomal RNA.

Sharad Awasthi, Mamta Verma, Arun Mahesh, Mohd Imran K Khan, Gayathri Govindaraju, Arumugam Rajavelu, Pavithra L Chavali, Sreenivas Chavali, Arunkumar Dhayalan

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 47 citations in OpenAlex.

  1. Glucan exopolysaccharide fromFrontiers in molecular biosciences · 2026
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  12. Functions and mechanisms of RNA helicases in plants.Journal of experimental botany · 2023
    Review
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  17. Observational
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Sharad AwasthiDepartment of Biotechnology, Pondicherry University, Puducherry 605 014, India.
Mamta VermaDepartment of Biotechnology, Pondicherry University, Puducherry 605 014, India.
Arun MaheshDepartment of Biotechnology, Pondicherry University, Puducherry 605 014, India.
Mohd Imran K KhanDepartment of Biotechnology, Pondicherry University, Puducherry 605 014, India.
Gayathri GovindarajuBacterial and Parasite Disease Biology, Rajiv Gandhi Center for Biotechnology, Trivandrum 695 014, India.
Arumugam RajaveluBacterial and Parasite Disease Biology, Rajiv Gandhi Center for Biotechnology, Trivandrum 695 014, India.
Pavithra L ChavaliMRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK.
Sreenivas ChavaliMRC Laboratory of Molecular Biology, Francis Crick Avenue, Cambridge Biomedical Campus, Cambridge CB2 0QH, UK.
Arunkumar DhayalanDepartment of Biotechnology, Pondicherry University, Puducherry 605 014, India.
Pondicherry University · INMRC Laboratory of Molecular Biology · GBRajiv Gandhi Centre for Biotechnology · IN

Funding

Medical Research Council MC_U105185859
6 · The paper itself

Abstract

Among the proteins predicted to be a part of the DExD box RNA helicase family, the functions of DDX49 are unknown. Here, we characterize the enzymatic activities and functions of DDX49 by comparing its properties with the well-studied RNA helicase, DDX39B. We find that DDX49 exhibits a robust ATPase and RNA helicase activity, significantly higher than that of DDX39B. DDX49 is required for the efficient export of poly (A)+ RNA from nucleus in a splicing-independent manner. Furthermore, DDX49 is a resident protein of nucleolus and regulates the steady state levels of pre-ribosomal RNA by regulating its transcription and stability. These dual functions of regulating mRNA export and pre-ribosomal RNA levels enable DDX49 to modulate global translation. Phenotypically, DDX49 promotes proliferation and colony forming potential of cells. Strikingly, DDX49 is significantly elevated in diverse cancer types suggesting that the increased abundance of DDX49 has a role in oncogenic transformation of cells. Taken together, this study shows the physiological role of DDX49 in regulating distinct steps of mRNA and pre-ribosomal RNA metabolism and hence translation and potential pathological role of its dysregulation, especially in cancers.

Indexed as

Protein BiosynthesisAdenosine TriphosphateCarcinogenesisCell LineCell NucleolusCell ProliferationDEAD-box RNA HelicasesHumansRNA HelicasesRNA, MessengerRNA PrecursorsRNA, RibosomalRNA StabilityRNA TransportAdenosine TriphosphateDDX49 protein, humanDEAD-box RNA HelicasesRNA HelicasesRNA, MessengerRNA PrecursorsRNA, Ribosomal

Identifiers

PMID29618122
PMCPMC6158705
OpenAlexW2794690849

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.