Evidence map›Paper›PMID 29615492›Full record

ArticleThe Journal of biological chemistry2018

Surface-exposed loops and an acidic patch in the Scl1 protein of group A

Dudley H McNitt, Soo Jeon Choi, Douglas R Keene, Livingston Van De Water, Flavia Squeglia, Rita Berisio, Slawomir Lukomski

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
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  8. TheFrontiers in cellular and infection microbiology · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Dudley H McNittFrom the Department of Microbiology, Immunology, and Cell Biology, West Virginia University School of Medicine, Morgantown, West Virginia 26506.
Soo Jeon ChoiFrom the Department of Microbiology, Immunology, and Cell Biology, West Virginia University School of Medicine, Morgantown, West Virginia 26506.
Douglas R Keenethe Micro-imaging Center, Shriners Hospital for Children, Portland, Oregon 97239.
Livingston Van De Waterthe Departments of Surgery and Regenerative and Cancer Cell Biology, Albany Medical College, Albany, New York 12208, and.
Flavia Squegliathe Institute of Biostructures and Bioimaging, Italian National Research Council, Via Mezzocannone 16, I-80134 Naples, Italy.
Rita Berisiothe Institute of Biostructures and Bioimaging, Italian National Research Council, Via Mezzocannone 16, I-80134 Naples, Italy.
Slawomir LukomskiFrom the Department of Microbiology, Immunology, and Cell Biology, West Virginia University School of Medicine, Morgantown, West Virginia 26506, slukomski@hsc.wvu.edu.
West Virginia University · USAlbany Medical Center Hospital · USInstitute of Biostructure and Bioimaging · ITNational Research Council · ITShriners Hospitals for Children - Portland · US

Funding

West Virginia Flow Cytometry Core FacilityP30GM103488 · NIGMS · WEST VIRGINIA UNIVERSITY · PI CUFF, CHRISTOPHER F · 2012 to 2016
$4.8M
Sc1 Proteins of S pyogenes: Biology and FunctionR01AI050666 · NIAID · WEST VIRGINIA UNIVERSITY · PI LUKOMSKI, SLAWOMIR · 2002 to 2005
$1.0M
Scl1-mediated immune evasion of the rheumatologenic group A StreptococcusR21AI083683 · NIAID · WEST VIRGINIA UNIVERSITY · PI LUKOMSKI, SLAWOMIR · 2010 to 2011
$404k
Special Becton Dickinson Fortessa Flow CytometerS10OD016165 · OD · WEST VIRGINIA UNIVERSITY · PI CUFF, CHRISTOPHER F · 2013 to 2013
$384k
NIAID NIH HHS R01 AI050666NIAID NIH HHS R21 AI083683NIGMS NIH HHS P30 GM103488NIH HHS S10 OD016165
6 · The paper itself

Abstract

Keratinized epidermis constitutes a powerful barrier of the mucosa and skin, effectively preventing bacterial invasion, unless it is wounded and no longer protective. Wound healing involves deposition of distinct extracellular matrix (ECM) proteins enriched in cellular fibronectin (cFn) isoforms containing extra domain A (EDA). The streptococcal collagen-like protein 1 (Scl1) is a surface adhesin of group A

Indexed as

Amino Acid SequenceBacterial ProteinsBinding SitesCloning, MolecularCollagenCrystallography, X-RayEscherichia coliExtracellular MatrixFibronectinsGene ExpressionGenetic VectorsHumansKineticsLamininLipoproteins, LDLModels, MolecularBacterial ProteinsCollagenFibronectinsFN1 protein, humanLamininLipoproteins, LDLRecombinant ProteinsScl1 protein, Streptococcusadhesinfibronectinlamininlow-density lipoprotein (LDL)streptococcal collagen-like proteinStreptococcus pyogenes (S. pyogenes)

Identifiers

PMID29615492
PMCPMC5961034
OpenAlexW2795945884

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.