Evidence map›Paper›PMID 29615257›Full record

ArticleVeterinary microbiology2018

Evaluating the most appropriate pooling ratio for EDTA blood samples to detect Bluetongue virus using real-time RT-PCR.

John Flannery, Paulina Rajko-Nenow, Hayley Hicks, Holly Hill, Simon Gubbins, Carrie Batten

Abstract readEvaluation Study
In one paragraph

Article in Veterinary microbiology, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

John FlanneryThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom. Electronic address: john.flannery@pirbright.ac.uk.
Paulina Rajko-NenowThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
Hayley HicksThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
Holly HillThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
Simon GubbinsThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.
Carrie BattenThe Pirbright Institute, Pirbright, Woking, Surrey, United Kingdom.

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00007033Biotechnology and Biological Sciences Research Council BBS/E/I/00007036Biotechnology and Biological Sciences Research Council BBS/E/I/00007037
6 · The paper itself

Abstract

The control of Bluetongue virus (BTV) presents a significant challenge to European Union (EU) member states as trade restrictions are placed on animals imported from BTV-affected countries. BTV surveillance programs are costly to maintain, thus, pooling of EDTA blood samples is used to reduce costs and increase throughput. We investigated different pooling ratios (1:2, 1:5, 1:10 and 1:20) for EDTA blood samples to detect a single BTV positive animal. A published real-time RT-PCR assay (Hofmann et al., 2008) and a commercial assay (ThermoFisher VetMax™ BTV NS3 kit) were used to analyse BTV RNA extracted from pooled EDTA blood samples. The detection rate was low for the onset of infection sample (0-2 days post infection (dpi); C

Indexed as

AnimalsBluetongueBluetongue virusEdetic AcidEpidemiological MonitoringEuropeReal-Time Polymerase Chain ReactionRNA, ViralSensitivity and SpecificitySerogroupSheepSpecimen HandlingViremiaEdetic AcidRNA, ViralBluetongue virusEuropean serotypesReal-time RT-PCRSurveillanceVetMAX

Identifiers

PMID29615257
PMCPMC5904549

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.