Evidence map›Paper›PMID 29614266›Full record

ArticleJournal of immunological methods2018

Genetic engineering in primary human B cells with CRISPR-Cas9 ribonucleoproteins.

Chung-An M Wu, Theodore L Roth, Yuriy Baglaenko, Dario M Ferri, Patrick Brauer, Juan Carlos Zuniga-Pflucker, Kristina W Rosbe, Joan E Wither, Alexander Marson, Christopher D C Allen

Open access · greenAbstract read
In one paragraph

Article in Journal of immunological methods, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Synthetic Gene Circuits for Regulation of Next-Generation Cell-Based Therapeutics.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Review
  7. Flow Cytometric Identification of Human IgEMethods in molecular biology (Clifton, N.J.) · 2024
    Article
  8. Article
  9. B cell receptor ligation induces IgE plasma cell elimination.The Journal of experimental medicine · 2023
    Article
  10. Gene Editing of Primary Rhesus Macaque B Cells.Journal of visualized experiments : JoVE · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
  17. Genome edited B cells: a new frontier in immune cell therapies.Molecular therapy : the journal of the American Society of Gene Therapy · 2021
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Chung-An M WuCardiovascular Research Institute, Sandler Asthma Basic Research Center, 555 Mission Bay Blvd S, University of California, San Francisco, San Francisco, CA 94143, USA.
Theodore L RothDepartment of Microbiology and Immunology, 513 Parnassus Ave, University of California, San Francisco, CA 94143, USA.
Yuriy BaglaenkoKrembil Research Institute, 60 Leonard Ave, University Health Network, Toronto, Ontario, Canada; Department of Immunology, 60 Leonard Ave, University of Toronto, Toronto, Ontario, Canada.
Dario M FerriKrembil Research Institute, 60 Leonard Ave, University Health Network, Toronto, Ontario, Canada; Department of Immunology, 60 Leonard Ave, University of Toronto, Toronto, Ontario, Canada.
Patrick BrauerDepartment of Immunology, 60 Leonard Ave, University of Toronto, Toronto, Ontario, Canada; Sunnybrook Research Institute, 2075 Bayview Ave, University of Toronto, Toronto, Ontario, Canada.
Juan Carlos Zuniga-PfluckerDepartment of Immunology, 60 Leonard Ave, University of Toronto, Toronto, Ontario, Canada; Sunnybrook Research Institute, 2075 Bayview Ave, University of Toronto, Toronto, Ontario, Canada.
Kristina W RosbeDepartment of Otolaryngology, 550 16th St, University of California, San Francisco, San Francisco, CA 94143, USA.
Joan E WitherKrembil Research Institute, 60 Leonard Ave, University Health Network, Toronto, Ontario, Canada; Department of Immunology, 60 Leonard Ave, University of Toronto, Toronto, Ontario, Canada; Department of Medicine, 60 Leonard Ave, University of Toronto, Toronto, Ontario, Canada. Electronic address: Joan.Wither@uhnresearch.ca.
Alexander MarsonDepartment of Microbiology and Immunology, 513 Parnassus Ave, University of California, San Francisco, CA 94143, USA; Department of Medicine, Diabetes Center, Helen Diller Family Comprehensive Cancer Center, 513 Parnassus Ave, University of California, San Francisco, CA 94143, USA; Innovative Genomics Institute, 2151 Berkeley Way, University of California, Berkeley, Berkeley, CA 94720, USA; Chan Zuckerberg Biohub, 499 Illinois St, San Francisco, CA 94158, USA. Electronic address: Alexander.Marson@ucsf.edu.
Christopher D C AllenCardiovascular Research Institute, Sandler Asthma Basic Research Center, 555 Mission Bay Blvd S, University of California, San Francisco, San Francisco, CA 94143, USA; Department of Anatomy, 555 Mission Bay Blvd S, University of California, San Francisco, San Francisco, CA 94143, USA. Electronic address: Chris.Allen@ucsf.edu.
University of California, San Francisco · USUniversity Health Network · CASunnybrook Health Science Centre · CA

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007618 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANDERSON, MARK S · 1985 to 2020
$29.6M
Research BaseP30DK063720 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KRUMMEL, MATTHEW F · 2003 to 2019
$21.8M
DIABETES, ENDOCRINOLOGY &METABOLISM TRAINING PROGRAMT32DK007418 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI EDWARD C HSIAO · 1986 to 2026
$14.3M
Regulation of IgE responses by B cell receptor signalingR01AI130470 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ALLEN, CHRISTOPHER DAVID CABALLERO · 2018 to 2022
$2.0M
CIHR PJT-148948Howard Hughes Medical InstituteNIAID NIH HHS R01 AI130470NIDDK NIH HHS P30 DK063720NIDDK NIH HHS T32 DK007418NIGMS NIH HHS T32 GM007618
6 · The paper itself

Abstract

Genome editing in human cells with targeted nucleases now enables diverse experimental and therapeutic genome engineering applications, but extension to primary human B cells remains limited. Here we report a method for targeted genetic engineering in primary human B cells, utilizing electroporation of CRISPR-Cas9 ribonucleoproteins (RNPs) to introduce gene knockout mutations at protein-coding loci with high efficiencies that in some cases exceeded 80%. Further, we demonstrate knock-in editing of targeted nucleotides with efficiency exceeding 10% through co-delivery of oligonucleotide templates for homology directed repair. We delivered Cas9 RNPs in two distinct in vitro culture systems to achieve editing in both undifferentiated B cells and activated B cells undergoing differentiation, reflecting utility in diverse experimental conditions. In summary, we demonstrate a powerful and scalable research tool for functional genetic studies of human B cell biology that may have further applications in engineered B cell therapeutics.

Indexed as

CRISPR-Cas SystemsGenetic EngineeringAdolescentAdultB-LymphocytesCell LineGene Knockout TechniquesHumansMutationPalatine TonsilRecombinational DNA RepairRibonucleoproteinsSialic Acid Binding Ig-like Lectin 2Young AdultRibonucleoproteinsSialic Acid Binding Ig-like Lectin 2Cas9 ribonucleoproteinCRISPR-Cas9Genome engineeringPrimary human B cells

Identifiers

PMID29614266
PMCPMC6124898
OpenAlexW2794836173

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.