Evidence map›Paper›PMID 29614069›Full record

ArticlePloS one2018

Prediction of extended high viremia among newly HIV-1-infected persons in sub-Saharan Africa.

Kimberly A Powers, Matthew A Price, Etienne Karita, Anatoli Kamali, William Kilembe, Susan Allen, Eric Hunter, Linda-Gail Bekker, Shabir Lakhi, Mubiana Inambao and 5 more

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in PloS one, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 6 countries.

Kimberly A PowersDepartment of Epidemiology, Gillings School of Global Public Health, The University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, United States of America.ORCID 0000-0001-7980-9846
Matthew A PriceInternational AIDS Vaccine Initiative, New York, New York, United States of America.
Etienne KaritaProject San Francisco, Kigali, Rwanda.
Anatoli KamaliInternational AIDS Vaccine Initiative, New York, New York, United States of America.
William KilembeZambia-Emory Research Project, Lusaka & Copperbelt, Zambia.
Susan AllenDepartment of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia, United States of America.
Eric HunterDepartment of Pathology and Laboratory Medicine, Emory University, Atlanta, Georgia, United States of America.
Linda-Gail BekkerDesmond Tutu HIV Centre, University of Cape Town, Cape Town, South Africa.
Shabir LakhiZambia-Emory Research Project, Lusaka & Copperbelt, Zambia.
Mubiana InambaoZambia-Emory Research Project, Lusaka & Copperbelt, Zambia.
Omu AnzalaKAVI-ICR University of Nairobi, Nairobi, Kenya.
Mary H LatkaThe Aurum Institute, Johannesburg, South Africa.
Patricia E FastInternational AIDS Vaccine Initiative, New York, New York, United States of America.
Jill GilmourInternational AIDS Vaccine Initiative, New York, New York, United States of America.
Eduard J SandersKenya Medical Research Institute, Kilifi, Kenya.
International AIDS Vaccine Initiative · USEmory University · USAurum Institute · ZADesmond Tutu HIV Foundation · ZAKenya Medical Research Institute · KEUniversity of Nairobi · KEUniversity of North Carolina at Chapel Hill · US

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
CTL and HIV Polymorphisms in Heterosexual TransmissionR01AI064060 · NIAID · EMORY UNIVERSITY · PI GOEPFERT, PAUL A., HUNTER, ERIC · 2005 to 2019
$21.7M
NIAID NIH HHS R01 AI064060NIH HHS P51 OD011132Wellcome Trust
6 · The paper itself

Abstract

objectivePrompt identification of newly HIV-infected persons, particularly those who are most at risk of extended high viremia (EHV), allows important clinical and transmission prevention benefits. We sought to determine whether EHV could be predicted during early HIV infection (EHI) from clinical, demographic, and laboratory indicators in a large HIV-1 incidence study in Africa.

designAdults acquiring HIV-1 infection were enrolled in an EHI study assessing acute retroviral syndrome (ARS) symptoms and viral dynamics.

methodsEstimated date of infection (EDI) was based on a positive plasma viral load or p24 antigen test prior to seroconversion, or the mid-point between negative and positive serological tests. EHV was defined as mean untreated viral load ≥5 log10 copies/ml 130-330 days post-EDI. We used logistic regression to develop risk score algorithms for predicting EHV based on sex, age, number of ARS symptoms, and CD4 and viral load at diagnosis.

resultsModels based on the full set of five predictors had excellent performance both in the full population (c-statistic = 0.80) and when confined to persons with each of three HIV-1 subtypes (c-statistic = 0.80-0.83 within subtypes A, C, and D). Reduced models containing only 2-4 predictors performed similarly. In a risk score algorithm based on the final full-population model, predictor scores were one for male sex and enrollment CD4<350 cells/mm3, and two for having enrollment viral load >4.9 log10 copies/ml. With a risk score cut-point of two, this algorithm was 85% sensitive (95% CI: 76%-91%) and 61% specific (55%-68%) in predicting EHV.

conclusionsSimple risk score algorithms can reliably identify persons with EHI in sub-Saharan Africa who are likely to sustain high viral loads if treatment is delayed. These algorithms may be useful for prioritizing intensified efforts around care linkage and retention, treatment initiation, adherence support, and partner services to optimize clinical and prevention outcomes.

Indexed as

AdolescentAdultAfrica South of the SaharaAlgorithmsCD4 AntigensFemaleHIV-1HIV InfectionsHumansLogistic ModelsMaleMiddle AgedModels, TheoreticalViral LoadViremiaYoung AdultCD4 Antigens

Identifiers

PMID29614069
PMCPMC5882095
OpenAlexW2795971837

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.