Evidence map›Paper›PMID 29611033›Full record

ReviewBiophysical reviews2018

Aqueous ionic liquids in comparison with standard co-solutes : Differences and common principles in their interaction with protein and DNA structures.

Ewa Anna Oprzeska-Zingrebe, Jens Smiatek

Abstract readReview
In one paragraph

Review in Biophysical reviews, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Excited State Dynamics of Isolated 6- and 8-Hydroxyquinoline Molecules.Chemphyschem : a European journal of chemical physics and physical chemistry · 2020
    Article
  7. Raman Spectroscopic Signature of Ectoine Conformations in Bulk Solution and Crystalline State.Chemphyschem : a European journal of chemical physics and physical chemistry · 2020
    Article
  8. Article
  9. Tuning Water Networks via Ionic Liquid/Water Mixtures.International journal of molecular sciences · 2020
    Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ewa Anna Oprzeska-ZingrebeInstitute for Computational Physics, University of Stuttgart, Allmandring 3, 70569, Stuttgart, Germany.
Jens SmiatekInstitute for Computational Physics, University of Stuttgart, Allmandring 3, 70569, Stuttgart, Germany. j.smiatek@fz-juelich.de.ORCID http://orcid.org/0000-0002-3821-0690
University of Stuttgart · DE

Funding

Deutsche Forschungsgemeinschaft SFB 716 Project C8
6 · The paper itself

Abstract

Ionic liquids (ILs) are versatile solvents for a broad range of biotechnological applications. Recent experimental and simulation results highlight the potential benefits of dilute ILs in aqueous solution (aqueous ILs) in order to modify protein and DNA structures systematically. In contrast to a limited number of standard co-solutes like urea, ectoine, trimethylamine-N-oxide (TMAO), or guanidinium chloride, the large amount of possible cation and anion combinations in aqueous ILs can be used to develop tailor-made stabilizers or destabilizers for specific purposes. In this review article, we highlight common principles and differences between aqueous ILs and standard co-solutes with a specific focus on their underlying macromolecular stabilization or destabilization behavior. In combination with statistical thermodynamics theories, we present an efficient framework, which is used to classify structure modification effects consistently. The crucial importance of enthalpic and entropic contributions to the free energy change upon IL-assisted macromolecular unfolding in combination with a complex destabilization mechanism is described in detail. A special focus is also set on aqueous IL-DNA interactions, for which experimental and simulation outcomes are summarized and discussed in the context of previous findings.

Indexed as

Co-solutesDNAIonic liquidsKirkwood-Buff theoryProteins

Identifiers

PMID29611033
PMCPMC5988629
OpenAlexW2795672346

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.