Evidence map›Paper›PMID 29610295›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2018

SAMHD1 suppresses innate immune responses to viral infections and inflammatory stimuli by inhibiting the NF-κB and interferon pathways.

Shuliang Chen, Serena Bonifati, Zhihua Qin, Corine St Gelais, Karthik M Kodigepalli, Bradley S Barrett, Sun Hee Kim, Jenna M Antonucci, Katherine J Ladner, Olga Buzovetsky and 6 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed, 1 pooled it
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed, 1 synthesis or guideline pooled it, 121 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. CNS1-dependent regulatory T cells shape recovery from acute lung injury.Journal of immunology (Baltimore, Md. : 1950) · 2026
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36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Shuliang ChenCenter for Retrovirus Research, Department of Veterinary Biosciences, Ohio State University, Columbus, OH 43210.
Serena BonifatiCenter for Retrovirus Research, Department of Veterinary Biosciences, Ohio State University, Columbus, OH 43210.
Zhihua QinCenter for Retrovirus Research, Department of Veterinary Biosciences, Ohio State University, Columbus, OH 43210.
Corine St GelaisCenter for Retrovirus Research, Department of Veterinary Biosciences, Ohio State University, Columbus, OH 43210.
Karthik M KodigepalliCenter for Retrovirus Research, Department of Veterinary Biosciences, Ohio State University, Columbus, OH 43210.
Bradley S BarrettDepartment of Medicine, University of Colorado School of Medicine, Aurora, CO 80045.
Sun Hee KimCenter for Retrovirus Research, Department of Veterinary Biosciences, Ohio State University, Columbus, OH 43210.
Jenna M AntonucciCenter for Retrovirus Research, Department of Veterinary Biosciences, Ohio State University, Columbus, OH 43210.
Katherine J LadnerDepartment of Cancer Biology and Genetics, Ohio State University, Columbus, OH 43210.
Olga BuzovetskyDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520.
Kirsten M KnechtDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520.
Yong XiongDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520.
Jacob S YountDepartment of Microbial Infection and Immunity, Ohio State University, Columbus, OH 43210.
Denis C GuttridgeDepartment of Cancer Biology and Genetics, Ohio State University, Columbus, OH 43210.
Mario L SantiagoDepartment of Medicine, University of Colorado School of Medicine, Aurora, CO 80045.
Li WuCenter for Retrovirus Research, Department of Veterinary Biosciences, Ohio State University, Columbus, OH 43210; wu.840@osu.edu.ORCID 0000-0002-5468-2487
The Ohio State University · USYale University · USUniversity of Colorado Denver · USWuhan University · CN

Funding

Translational Therapeutics Research Program (TT)P30CA016058 · NCI · OHIO STATE UNIVERSITY · PI Jennifer A. Woyach · 1985 to 2026
$132.3M
Skill Development for Diverse Scientific Careers: A New Course Predoctoral Program in Cellular and Molecular BiologyT32GM007223 · NIGMS · YALE UNIVERSITY · PI BASERGA, SUSAN J · 1985 to 2019
$31.0M
PREDOCTORAL PROGRAM IN BIOPHYSICST32GM008283 · NIGMS · YALE UNIVERSITY · PI XIONG, YONG · 1988 to 2022
$10.5M
Mechanisms of innate resistance to virus infectionsR01AI130110 · NIAID · OHIO STATE UNIVERSITY · PI Jacob Yount · 2017 to 2026
$4.3M
Viral Hijacking of Host Membrane Trafficking PathwaysR01AI102778 · NIAID · YALE UNIVERSITY · PI GUATELLI, JOHN C., XIONG, YONG · 2013 to 2017
$3.0M
APOBEC3/Rfv3 and Immunoglobulin Somatic HypermutationR01AI116603 · NIAID · UNIVERSITY OF COLORADO DENVER · PI SANTIAGO, MARIO LUIS · 2016 to 2020
$2.5M
Mechanisms of SAMHD1-mediated HIV-1 restriction in dendritic cellsR01AI104483 · NIAID · OHIO STATE UNIVERSITY · PI WU, LI · 2013 to 2016
$1.5M
Mechanisms of HIV-1 RNA Methylation in Regulating Viral ReplicationR01GM128212 · NIGMS · OHIO STATE UNIVERSITY · PI WU, LI · 2017 to 2018
$831k
HIV-1 Nef Interaction with Nef-associated Factor 1 Regulates Viral LatencyR01AI120209 · NIAID · OHIO STATE UNIVERSITY · PI WU, LI · 2015 to 2017
$600k
NCI NIH HHS P30 CA016058NIAID NIH HHS R01 AI102778NIAID NIH HHS R01 AI104483NIAID NIH HHS R01 AI116603NIAID NIH HHS R01 AI120209NIAID NIH HHS R01 AI130110NIGMS NIH HHS R01 GM128212NIGMS NIH HHS T32 GM007223NIGMS NIH HHS T32 GM008283
6 · The paper itself

Abstract

Sterile alpha motif and HD-domain-containing protein 1 (SAMHD1) blocks replication of retroviruses and certain DNA viruses by reducing the intracellular dNTP pool. SAMHD1 has been suggested to down-regulate IFN and inflammatory responses to viral infections, although the functions and mechanisms of SAMHD1 in modulating innate immunity remain unclear. Here, we show that SAMHD1 suppresses the innate immune responses to viral infections and inflammatory stimuli by inhibiting nuclear factor-κB (NF-κB) activation and type I interferon (IFN-I) induction. Compared with control cells, infection of SAMHD1-silenced human monocytic cells or primary macrophages with Sendai virus (SeV) or HIV-1, or treatment with inflammatory stimuli, induces significantly higher levels of NF-κB activation and IFN-I induction. Exogenous SAMHD1 expression in cells or SAMHD1 reconstitution in knockout cells suppresses NF-κB activation and IFN-I induction by SeV infection or inflammatory stimuli. Mechanistically, SAMHD1 inhibits NF-κB activation by interacting with NF-κB1/2 and reducing phosphorylation of the NF-κB inhibitory protein IκBα. SAMHD1 also interacts with the inhibitor-κB kinase ε (IKKε) and IFN regulatory factor 7 (IRF7), leading to the suppression of the IFN-I induction pathway by reducing IKKε-mediated IRF7 phosphorylation. Interactions of endogenous SAMHD1 with NF-κB and IFN-I pathway proteins were validated in human monocytic cells and primary macrophages. Comparing splenocytes from

Indexed as

Immunity, InnateAnimalsCells, CulturedDown-RegulationGene Expression RegulationGene SilencingHEK293 CellsHIVHumansI-kappa B KinaseInflammationInterferon-alphaInterferon Regulatory Factor-7MacrophagesMaleMiceI-kappa B KinaseInterferon-alphaInterferon Regulatory Factor-7IRF7 protein, humanNF-kappa BNF-KappaB Inhibitor alphaRecombinant ProteinsSAM Domain and HD Domain-Containing Protein 1SAMHD1 protein, humanSamhd1 protein, mouseinflammatory stimuliNF-kBSAMHD1type I interferonviral infection

Identifiers

PMID29610295
PMCPMC5910870
OpenAlexW2796064228

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.