Evidence map›Paper›PMID 29608565›Full record

ArticlePLoS genetics2018

Natural allelic variation of the AZI1 gene controls root growth under zinc-limiting condition.

Nadia Bouain, Santosh B Satbhai, Arthur Korte, Chorpet Saenchai, Guilhem Desbrosses, Pierre Berthomieu, Wolfgang Busch, Hatem Rouached

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
12.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. TheFrontiers in plant science · 2023
    Article
  7. Article
  8. Article
  9. Physiological and Transcriptomic Analysis ofInternational journal of molecular sciences · 2022
    Article
  10. An allelic variant in the ACS7 gene promotes primary root growth in watermelon.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Genomic characterization of ZIP genes in pigeonpea (Physiology and molecular biology of plants : an international journal of functional plant biology · 2021
    Article
  16. ArabidopsisInternational journal of molecular sciences · 2021
    Article
  17. Article
  18. Review
  19. Rhizosphere microbiome mediates systemic root metabolite exudation by root-to-root signaling.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 4 countries.

Nadia BouainBPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France.
Santosh B SatbhaiGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna, Austria.ORCID 0000-0002-2770-656X
Arthur KorteEvolutionary Genomics Center for Computational and Theoretical Biology (CCTB), University Würzburg, Würzburg, Germany.ORCID 0000-0003-0831-1463
Chorpet SaenchaiBPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France.
Guilhem DesbrossesBPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France.ORCID 0000-0003-3965-9972
Pierre BerthomieuBPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France.ORCID 0000-0003-3358-2417
Wolfgang BuschGregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna, Austria.ORCID 0000-0003-2042-7290
Hatem RouachedBPMP, Univ Montpellier, CNRS, INRA, SupAgro, Montpellier, France.ORCID 0000-0002-7751-0477
Centre National de la Recherche Scientifique · FRSalk Institute for Biological Studies · USUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zinc is an essential micronutrient for all living organisms and is involved in a plethora of processes including growth and development, and immunity. However, it is unknown if there is a common genetic and molecular basis underlying multiple facets of zinc function. Here we used natural variation in Arabidopsis thaliana to study the role of zinc in regulating growth. We identify allelic variation of the systemic immunity gene AZI1 as a key for determining root growth responses to low zinc conditions. We further demonstrate that this gene is important for modulating primary root length depending on the zinc and defence status. Finally, we show that the interaction of the immunity signal azelaic acid and zinc level to regulate root growth is conserved in rice. This work demonstrates that there is a common genetic and molecular basis for multiple zinc dependent processes and that nutrient cues can determine the balance of growth and immune responses in plants.

Indexed as

AllelesGenes, PlantGenetic VariationArabidopsisArabidopsis ProteinsDicarboxylic AcidsOryzaPlant RootsSignal TransductionZincArabidopsis Proteinsazelaic acidAZI1 protein, ArabidopsisDicarboxylic AcidsZinc

Identifiers

PMID29608565
PMCPMC5897037
OpenAlexW2795775004

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.