Evidence map›Paper›PMID 29605921›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2018

Detecting Purinosome Metabolon Formation with Fluorescence Microscopy.

Anthony M Pedley, Stephen J Benkovic

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Research square · 2026
    Article
  2. Coordination of cell organelles to promote metabolon formation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Review
  4. Article
  5. Review
  6. The Purinosome: A Case Study for a Mammalian Metabolon.Annual review of biochemistry · 2022
    Review
  7. Human de novo purine biosynthesis.Critical reviews in biochemistry and molecular biology · 2021
    Review
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Anthony M PedleyDepartment of Chemistry, The Pennsylvania State University, University Park, PA, USA.
Stephen J BenkovicDepartment of Chemistry, The Pennsylvania State University, University Park, PA, USA. sjb1@psu.edu.
Pennsylvania State University · US

Funding

TRANSFORMYLASE ENZYMES--DIHYDROFOLATE REDUCTASER01GM024129 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI BENKOVIC, STEPHEN J · 1985 to 2024
$5.2M
TRANSFORMYLASE ENZYMES/DIHYDROFOLATE REDUCTASER37GM024129 · NIGMS · PENNSYLVANIA STATE UNIVERSITY-UNIV PARK · PI BENKOVIC, STEPHEN J · 1987 to 1996
–
NIGMS NIH HHS R01 GM024129NIGMS NIH HHS R37 GM024129
6 · The paper itself

Abstract

A long-standing hypothesis in the de novo purine biosynthetic pathway is that there must be highly coordinated processes to allow for enhanced metabolic flux when a cell demands purines. One mechanism by which the pathway meets its cellular demand is through the spatial organization of pathway enzymes into multienzyme complexes called purinosomes. Cellular conditions known to impact the activity of enzymes in the pathway or overall pathway flux have been reflected in a change in the number of purinosome-positive cells or the density of purinosomes in a given cell. The following general protocols outline the steps needed for purinosome detection through transient expression of fluorescent protein chimeras or through immunofluorescence in purine-depleted HeLa cells using confocal laser scanning microscopy. These protocols define a purinosome as a colocalization of FGAMS with one additional pathway enzyme, such as PPAT or GART, and provide insights into the proper identification of a purinosome from other reported cellular bodies.

Indexed as

MetabolomeBiosynthetic PathwaysCarbon-Nitrogen LigasesCarbon-Nitrogen Ligases with Glutamine as Amide-N-DonorGreen Fluorescent ProteinsHeLa CellsHumansMicroscopy, FluorescenceNucleotidyltransferasesPhosphoribosylglycinamide FormyltransferasePurinesCarbon-Nitrogen LigasesCarbon-Nitrogen Ligases with Glutamine as Amide-N-Donorenhanced green fluorescent proteinGART protein, humanGreen Fluorescent ProteinsNucleotidyltransferasespantetheine-phosphate adenylyltransferasephosphoribosylformylglycinamidine synthetasePhosphoribosylglycinamide FormyltransferasepurinePurinesDe novo purine biosynthesisFluorescence microscopyMetabolonPurine metabolismPurinosome

Identifiers

PMID29605921
PMCPMC6396681
OpenAlexW2795259944

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.