Evidence map›Paper›PMID 29604129›Full record

ArticleProtein science : a publication of the Protein Society2018

Bicelle size modulates the rate of bacteriorhodopsin folding.

Timothy C Gruenhagen, Joshua J Ziarek, Jonathan P Schlebach

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Folding speeds of helical membrane proteins.Biochemical Society transactions · 2024
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Timothy C GruenhagenDepartment of Chemistry, Indiana University, Bloomington, Indiana, 47405-7102.
Joshua J ZiarekDepartment of Molecular and Cellular Biochemistry, Indiana University, Bloomington, Indiana, 47405-7102.
Jonathan P SchlebachDepartment of Chemistry, Indiana University, Bloomington, Indiana, 47405-7102.
Indiana University Bloomington · US

Funding

Deciphering GPCR signal transduction through NMR structure and dynamics studiesR00GM115814 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI ZIAREK, JOSHUA JAMES · 2017 to 2019
$747k
NIGMS NIH HHS R00 GM115814
6 · The paper itself

Abstract

The conformational equilibria of integral membrane proteins have proven extremely difficult to characterize within native lipid bilayers. To circumvent technical issues, investigations of the structure and stability of α-helical membrane proteins are often carried out in mixed micelle or bicelle solvents that mimic the membrane and facilitate measurements of reversible folding. Under these conditions, the energetics of membrane protein folding are typically proportional to the mole fraction of an anionic detergent in the micelle. However, investigations of the folding and unfolding of bacteriorhodopsin (bR) surprisingly revealed that the folding rate is also highly sensitive to the bulk molar concentration of lipids and detergents. We show here that this rate enhancement coincides with changes in bicelle size and suggest this effect arises through restriction of the conformational search space during folding. In conjunction with previous mutagenic studies, these results provide additional evidence that a topological search limits the rate of bR folding. Furthermore, this finding provides insights into the manner by which micellar and bicellar environments influence the conformational stability of polytopic membrane proteins.

Indexed as

Protein FoldingBacteriorhodopsinsLipid BilayersMicellesProtein ConformationThermodynamicsBacteriorhodopsinsLipid BilayersMicellesbicellesdetergentsfolding kineticsmembrane protein foldingmicelles

Identifiers

PMID29604129
PMCPMC5980500
OpenAlexW2795120904

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.