Evidence map›Paper›PMID 29603325›Full record

ArticleHepatology (Baltimore, Md.)2018

Loss of PDK4 switches the hepatic NF-κB/TNF pathway from pro-survival to pro-apoptosis.

Jianguo Wu, Yulan Zhao, Young-Ki Park, Ji-Young Lee, Ling Gao, Jiajun Zhao, Li Wang

Open access · bronzeAbstract read
In one paragraph

Article in Hepatology (Baltimore, Md.), 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 92 citations in OpenAlex.

  1. Article
  2. RELA Ablation Contributes to Progression of Hepatocellular Carcinoma with TP53Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
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  16. The mInternational journal of biological sciences · 2023
    Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Jianguo WuDepartment of Physiology and Neurobiology, Institute for Systems Genomics, University of Connecticut, Storrs, CT.
Yulan ZhaoDepartment of Physiology and Neurobiology, Institute for Systems Genomics, University of Connecticut, Storrs, CT.
Young-Ki ParkDepartment of Nutritional Sciences, Institute for Systems Genomics, University of Connecticut, Storrs, CT.
Ji-Young LeeDepartment of Nutritional Sciences, Institute for Systems Genomics, University of Connecticut, Storrs, CT.
Ling GaoDepartment of Endocrinology, Shandong Provincial Hospital affiliated to Shandong University, Jinan, China.
Jiajun ZhaoDepartment of Endocrinology, Shandong Provincial Hospital affiliated to Shandong University, Jinan, China.
Li WangDepartment of Physiology and Neurobiology, Institute for Systems Genomics, University of Connecticut, Storrs, CT.
University of Connecticut · USInstitute for Systems Biology · USShandong Provincial Hospital · CNShandong University · CN

Funding

The microRNA Control of Alcoholic Liver Injury and Hepatic Lipid MetabolismR01AA026322 · NIAAA · UNIVERSITY OF CONNECTICUT STORRS · PI SHIN, DONG JU · 2017 to 2021
$1.8M
LncRNA as a New Mediator of Bile Acid HomeostasisR01DK104656 · NIDDK · UNIVERSITY OF CONNECTICUT STORRS · PI WANG, LI · 2015 to 2018
$1.7M
Molecular Basis of Cancer Cell Metabolic ReprogrammingR01ES025909 · NIEHS · UNIVERSITY OF CONNECTICUT STORRS · PI WANG, LI · 2015 to 2017
$1.0M
Long noncoding RNAs in alcoholic liver diseaseR21AA024935 · NIAAA · INDIANA UNIVERSITY INDIANAPOLIS · PI LIANGPUNSAKUL, SUTHAT, WANG, LI · 2016 to 2017
$431k
Circadian Clock Regulation of Alcoholic Liver DiseaseI01BX002634 · VA · VA CONNECTICUT HEALTHCARE SYSTEM · PI WANG, LI · 2016 to 2019
–
BLRD VA I01 BX002634NIAAA NIH HHS R01 AA026322NIAAA NIH HHS R21 AA024935NIDDK NIH HHS R01 DK104656NIEHS NIH HHS R01 ES025909NIH HHS 1I01BX002634NIH HHS AA024935NIH HHS AA026322NIH HHS DK104656NIH HHS ES025909VA Merit Award
6 · The paper itself

Abstract

It has been established that nuclear factor kappa-light-chain-enhancer of activated B cells (NF-κB) members promote survival by upregulating antiapoptotic genes and that genetic and pharmacological inhibition of NF-κB is required for tumor necrosis factor (TNF)-induced hepatocyte apoptosis. In this study, we demonstrate that this pro-survival pathway is switched to pro-apoptosis under pyruvate dehydrogenase kinase 4 (PDK4)-deficient conditions. PDK4-deficiency triggered hepatic apoptosis concomitantly with increased numbers of aberrant mitochondria, reactive oxygen species (ROS) production, sustained c-Jun N-terminal Kinase (JNK) activation, and reduction of glutathione (GSH). Interestingly, PDK4 retained p65 in cytoplasm via a direct protein-protein interaction. Disruption of PDK4-p65 association promoted p65 nuclear translocation. This, in turn, facilitated p65 binding to the TNF promoter to activate TNF-TNFR1 apoptotic pathway. Pdk4

Indexed as

ApoptosisAnimalsCell RespirationHepatocytesMaleMice, Inbred C57BLMitochondriaNF-kappa BPyruvate Dehydrogenase Acetyl-Transferring KinaseReceptors, Tumor Necrosis Factor, Type ISignal TransductionTumor Necrosis Factor-alphaNF-kappa BPdk4 protein, mousePyruvate Dehydrogenase Acetyl-Transferring KinaseReceptors, Tumor Necrosis Factor, Type ITnf protein, mouseTnfrsf1a protein, mouseTumor Necrosis Factor-alpha

Identifiers

PMID29603325
PMCPMC6165716
OpenAlexW2794913319

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.